Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0508 ATGCTCTTCAACTTCCTCAAGCTGGCTTTCTCCAATTTCCAATGGGTTTTAGAGTTTCTTCTTTACCACCCATTTTACAGCTTTCGTCTTCATTATCATCATCAACCTCTTCAAGATCAGTTTCAGATATTTACAGAAGAAGAACCAGTAGAGATATGGCATCCTCGAGAAGAAGAAGAAGTGGATTGTGCAGTGTGCCTAAACAAGATTGGTGAAGGAGATGAAGTTAGAGCTCTTAGGTGTGAACATGTTTTTCATAGAGAATGTTTGAATCAATGGGTTGGTCTCAGGAACTTTACCTGTCCTCTTTGTAGGGACTTTCTGGGTTCTAGCAACAGGGTTGTTAATGGAAGACAAGTACATGTGCTTTTCTTCAAGTTTTCTTCATTCTCTGCTAATTCTGATGAGCGTGATAACTGGTGGCTACGGTGA 432 0.4028 MLFNFLKLAFSNFQWVLEFLLYHPFYSFRLHYHHQPLQDQFQIFTEEEPVEIWHPREEEEVDCAVCLNKIGEGDEVRALRCEHVFHRECLNQWVGLRNFTCPLCRDFLGSSNRVVNGRQVHVLFFKFSSFSANSDERDNWWLR 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0508 143 CDD RING-H2 63 105 - -
Alju09g0508 143 ProSiteProfiles Zinc finger RING-type profile. 63 105 IPR001841 -
Alju09g0508 143 Pfam Ring finger domain 62 105 IPR001841 -
Alju09g0508 143 SMART ring_2 63 104 IPR001841 -
Alju09g0508 143 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 43 110 IPR013083 -
Alju09g0508 143 PANTHER RING ZINC FINGER PROTEIN-RELATED 54 108 - -
Alju09g0508 143 SUPERFAMILY RING/U-box 45 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0508 Alju-ChrAlju09 7494739 7495170 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0508 62 114 C3H Transcription Factor Family AT1G15100 58.491 5.07e-16 68.6