Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0507 ATGTACGAATTAGAGACGACAGCTGGGTTTTCTGCAGAAACAGAGTCGTTTTTGTCAGAAGATTGCTTCTCCCAAATCGGTTCTTCTTCTATGGCCTCACACACTCATAACCCTAAATTTGCTGAGAATGTGGGTATTTCTTTGGAAACTTTAGCTTTTTCTTCACAAGCCGCTATGATTCCCAACATCGATGCTTCGTCGTTGATTGAACCAAACCCTTACAGTAATAATAGTATTGTCAATTCCAATTTGGTGGATGAGGTAAATCGTTTTGGCTCAAATCACCTAGTAATTCCATTTGACCAGTCCAAATCGGACACTTCTATGAACTTCCATCACCAAAATTATCATCATCAGCTTCAAAATCAACCACATCCTTACCCTGTAACTTCAGATCTTAATCACTGCAATTTTCTCTATAGCTTGCCCAGTAGTTCTTCCATCTCTTCGATTGTAAACTCAGCTACCCAGAAAAATAATTTTGAACTTCAAATGAATCATTCTGGGTCTGGCCATCCAACATCGGGGTTGTTGGAAAGTACAAATGTGTCCTCCTCTGTTTTGTTGCAGGACCCATTTTCTGGAGCAAACAGAGAGTGGTTTCAATCTCTGCCTGTGAGAAATGATATTCTGATGATGTTTGGTGGGGATGATGATGATGACAAAGAAGGTGGGAGTGGGGTTATTTCATATTTAGATGCTGGTCGTGGAAGAGAATTTGGTGATAGTAATAATGATTTCTTCAAGTTTTCCCATGATTTGGCTCCTAATGGAAGATCAAAGGGAATAGGAAGAGGAGGCAAAAGAGTCAGACAGGTCACTATTGAGAAGAAAAGGAGAGTGGATTTTACTAGCAAGTTTGATGCCTTAAAAGAACTCATCCCAAATCCAACTAAGAATGATAGAGCATCTCTGCTTTGTGGTGCTATTGAGTACATCCAAGAACTTCGAAGATCAGTGCATGATCTCACATTATTAGTGAACAAAAAGAGATCATGTGGGAGAGAAAGGACCAAGAGGCACAAGGTTGAGGAAGAAGAAGAAGAAGAACCTTTGGGGGACTTGGAGAGCTGCAATAATAACTTGAAGCCAGTGACCAGTGAAGCAGATCATCCTCATCATCATCATCATCAACTTCTTCTTCCAATCAATAGATGCATGATTAGGAGCACTTCTTGGCTTCAGAAGAAATCTGAAGACACAGAGGTTGATGTTCGAATAGTTGAAAACGATGTGACCATCAAGCTTGTGCAGAGAAAGAACACTAATTGCTTGCTTTATGCTTCCAAGGCTCTGGATGAACTTGAGCTTGATCTTCAACATGTTGCTGGTGGCCACATTGGCGATTTCTGCAGTTTTTTGTTCAACAGCAAGATATATGAAGGTTCTTCTGTGTGCGCGAGTGTCATAGCCAACAAGCTTATAGAAGTCATGGAATCAAGCTTGAAAGAGTGCCGTTAA 1461 0.4059 MYELETTAGFSAETESFLSEDCFSQIGSSSMASHTHNPKFAENVGISLETLAFSSQAAMIPNIDASSLIEPNPYSNNSIVNSNLVDEVNRFGSNHLVIPFDQSKSDTSMNFHHQNYHHQLQNQPHPYPVTSDLNHCNFLYSLPSSSSISSIVNSATQKNNFELQMNHSGSGHPTSGLLESTNVSSSVLLQDPFSGANREWFQSLPVRNDILMMFGGDDDDDKEGGSGVISYLDAGRGREFGDSNNDFFKFSHDLAPNGRSKGIGRGGKRVRQVTIEKKRRVDFTSKFDALKELIPNPTKNDRASLLCGAIEYIQELRRSVHDLTLLVNKKRSCGRERTKRHKVEEEEEEEPLGDLESCNNNLKPVTSEADHPHHHHHQLLLPINRCMIRSTSWLQKKSEDTEVDVRIVENDVTIKLVQRKNTNCLLYASKALDELELDLQHVAGGHIGDFCSFLFNSKIYEGSSVCASVIANKLIEVMESSLKECR 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0507 486 Pfam Helix-loop-helix DNA-binding domain 268 316 IPR011598 GO:0046983
Alju09g0507 486 Gene3D - 265 332 IPR036638 GO:0046983
Alju09g0507 486 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 266 329 IPR036638 GO:0046983
Alju09g0507 486 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 267 316 IPR011598 GO:0046983
Alju09g0507 486 PANTHER TRANSCRIPTION FACTOR BHLH91 94 481 IPR045895 GO:0006355|GO:0048658
Alju09g0507 486 SMART finulus 273 322 IPR011598 GO:0046983
Alju09g0507 486 MobiDBLite consensus disorder prediction 336 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0507 Alju-ChrAlju09 7481504 7483200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0507 264 484 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31220 48.869 5.13e-54 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju09g0507 HLH 2.2e-09 No_clan