Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0504 ATGTCGGTGGCGTCACCGTCTCCGGCAGTAGCCATCGCCCAACCACCACCACCACCACCACCAACAGCCTCCACCAATAGTAGTGCACCGCCGCCCGCCATCACTCCGCCACCTCAATCCTCTTCACCCCCACCACCAGGCAATCCCGCTTCGCAGCCGCCTTCAGCACCTCCGCCATCCTCAACCCCTTCTCCACTTCCGGTGACTCCGTCAGCACCTCCTCCCGCTGTGCCGTCGCCTCTGCCAGCGCAGTCGCGGCCACCTCAGGCATCATCACCCCCTCCGCCTGTCACTCCACCCCCATTGTCTCCTCCTCCTCCACAATCTGTTGCACCTGCGCCACAACCACCGTCACCTTCTAATGCTACGCCGCCTACTTCTCCTGTATTTTCCCCTCCACCACCAACACAATCACCGGCTCCACCGGTGAGTTCTCCTCCGCCAGCAAGTTCATCCCAACCACCGCCATCTAACCCATCTCCGGTGCCTTCGCCGCCTACACCATCGGCTAGTCCGCCAAGAAACTCACCTTCTCCTCCTACACAACCGTCAAAACCTCCCCAAAACTCCCCTCCGCCGCCTCCACCACCATCGTCAAACCCTCCGAAAACCTCACCTCCACCACCAACATCAAGTCCCCCGGGTAATTCATCTTCACCGCCATCATCTGTGCCACCGCCGAATACTTCATCACCTCCGTCTGCGGCTGTGCCACCCCGAGGGTCGCCGTCACCAGCATCAGCACCGCCTGTAAATTTACCTGCCCCTGCGGCACCTCGGATAAGTCCCCCTAGTTCCCAACCAAGTCCATCTTCAAGTTCTACCCCAAACTCATCTCCATCGCCGCCCATAATTCGAATGGCTCCACCTCCGTCCTCACTTTTGTCACCACCAGCTTCTCAAAATTCCTCCCCACCATCAGAAAGTGGAACAGAAAGTTCAAAAGCTAGAACAAATAATGGCATCAATACTGGTGTTGTAGTGGCCATCGGTGTAGCAGTGGGAATCATAGTGCTTTCCTTATTTGGAATTCTTACCTGGTATCTGATAAGGAGGCAAAAGAAACGGGGACCTGAGATTGGTAGTTATATCATGCCATCAGCTTCTGGTTCACTACCCGAGTCAGATTCATCCTTTTTTAAGACGCATTCTTCAGCTCCTCTTGTACAAAGCGGTTCCGGTAGTGACTCTGTGTACACACCTTCTGAGCCGGGTGGACTAGGCAACTCAAGGACATGGTTTACATATGAAGAACTAGTCAAAGCTACAAATGGTTTTGCGCCTCAAAATCTTTTGGGTGAGGGTGGATTTGGTTCTGTATATAAAGGATGCTTACCAGATGGGAGAGAGATAGCAGTCAAACAGTTGAAAATTGGTGGAGGTCAGGGTGAAAGGGAATTCAAAGCTGAAGTGGAGATTATTAGTCGCATTCATCACCGTCATTTAGTCTCTTTGGTGGGATACTGCATTTTAGACACCAGAAGGCTGCTCGTCTATGATTATGTCCCCAACAAAACCCTCTATCATCATCTTCATGGAGAAGGTATGCCAGTGTTGAGCTGGGAAAAACGTGTGAAGATTGCTGCTGGTGCAGCTCGAGGAATTGCTTATCTCCATGAAGATTGCAATCCTCGGATCATTCACAGGGATATCAAGTCCTCAAATATTCTTTTAGATTACAACTTTGATGCTCAAGTCTCAGATTTTGGGCTAGCCAAATTAACCCTTGATACAGTTACACACATAAGCACTCGTGTCATGGGAACATTTGGATATGTTGCACCTGAATATGCATCAAGTGGCAGATTGAGTGAGAAATCTGATGTATTTTCTTTTGGGGTTGTACTTCTGGAGCTCATCACCGGACGGAAGCCTGTAGATGCATCTCAACCCTTGGGGGATGAGAGCTTAGTTGAATGGGCTCGACCTTTGCTGAGTCATGCAATTGATAATGAGGAATTTGACGGTTTAACAGATCCTAGGCTTGAGAAGAACTATGTTGAAAGTGAGATGTTTCGCATGATTGAAATTGCTGCAACTTGCGTGCGACATTCGGCTGCCAAGAGACCTCGAATGGGGCAGGTTGTTAGAGCTTTTGAAAGCATAATAAATTCAGATTTAAACAACGGGATGAGGCCAGGGGAAAGCGAGGCATTCAACTCTGCCCAGCAATCTGCAGAAATAAGAATGTTTCGGAGGATGGCATTTGGTAGCCAAGACTACAGTACGGACTTTTTTAGTCAAGGAAGTGCGAATTCAATATAG 2265 0.5007 MSVASPSPAVAIAQPPPPPPPTASTNSSAPPPAITPPPQSSSPPPPGNPASQPPSAPPPSSTPSPLPVTPSAPPPAVPSPLPAQSRPPQASSPPPPVTPPPLSPPPPQSVAPAPQPPSPSNATPPTSPVFSPPPPTQSPAPPVSSPPPASSSQPPPSNPSPVPSPPTPSASPPRNSPSPPTQPSKPPQNSPPPPPPPSSNPPKTSPPPPTSSPPGNSSSPPSSVPPPNTSSPPSAAVPPRGSPSPASAPPVNLPAPAAPRISPPSSQPSPSSSSTPNSSPSPPIIRMAPPPSSLLSPPASQNSSPPSESGTESSKARTNNGINTGVVVAIGVAVGIIVLSLFGILTWYLIRRQKKRGPEIGSYIMPSASGSLPESDSSFFKTHSSAPLVQSGSGSDSVYTPSEPGGLGNSRTWFTYEELVKATNGFAPQNLLGEGGFGSVYKGCLPDGREIAVKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCILDTRRLLVYDYVPNKTLYHHLHGEGMPVLSWEKRVKIAAGAARGIAYLHEDCNPRIIHRDIKSSNILLDYNFDAQVSDFGLAKLTLDTVTHISTRVMGTFGYVAPEYASSGRLSEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLSHAIDNEEFDGLTDPRLEKNYVESEMFRMIEIAATCVRHSAAKRPRMGQVVRAFESIINSDLNNGMRPGESEAFNSAQQSAEIRMFRRMAFGSQDYSTDFFSQGSANSI 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0504 754 MobiDBLite consensus disorder prediction 1 319 - -
Alju09g0504 754 MobiDBLite consensus disorder prediction 384 404 - -
Alju09g0504 754 CDD STKc_IRAK 432 702 - -
Alju09g0504 754 FunFam Proline-rich receptor-like protein kinase PERK8 398 501 - -
Alju09g0504 754 Pfam Protein kinase domain 429 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0504 754 PRINTS Proline rich extensin signature 16 32 - -
Alju09g0504 754 PRINTS Proline rich extensin signature 42 54 - -
Alju09g0504 754 PRINTS Proline rich extensin signature 54 75 - -
Alju09g0504 754 Gene3D Phosphorylase Kinase; domain 1 403 501 - -
Alju09g0504 754 MobiDBLite consensus disorder prediction 297 319 - -
Alju09g0504 754 ProSiteProfiles Protein kinase domain profile. 426 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0504 754 SMART serkin_6 426 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0504 754 Gene3D Transferase(Phosphotransferase) domain 1 502 721 - -
Alju09g0504 754 ProSitePatterns Protein kinases ATP-binding region signature. 432 454 IPR017441 GO:0005524
Alju09g0504 754 MobiDBLite consensus disorder prediction 282 296 - -
Alju09g0504 754 MobiDBLite consensus disorder prediction 10 270 - -
Alju09g0504 754 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 334 734 IPR047117 -
Alju09g0504 754 FunFam proline-rich receptor-like protein kinase PERK8 502 713 - -
Alju09g0504 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 546 558 IPR008271 GO:0004672|GO:0006468
Alju09g0504 754 SUPERFAMILY Protein kinase-like (PK-like) 404 699 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0504 Alju-ChrAlju09 7430850 7435639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0504 190 750 Trihelix Transcription Factor Family AT1G70460 47.783 5.96e-170 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Alju09g0504 Pkinase 2.2e-42 CL0016