Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0467 ATGCAGAATCAGTACCCTAATTTCTCCTTATGTTTAGAACCTGAAGAACAAGACGAACACTCCATTTCCCTCTCTCTCGGACCCCCTGGCCAACACAATATTTCTTCCAATAAGGTGAACTCCACAGTTACTACTACTTGTTCTTCGTCCAACGACGTCGTATCACTACATCATCATCATCTTCTTCACCACCAAAACCCTAACTCTGATCTTGGCGTCACCGTCGCCCTCCACATCGGCCTCCCTGCATCTCCCACCACTAACACTGCTGGTGGTGGTGGTTCTAATGGCAATAAACCCGACCCATTAATGAGTTCGTCGTCTTCTTCGGGGCATGTTTCGGGTCAGTATTGGATTCCTTCCCCTGCCCAGATCCTCATCGGGCCCACCCAATTCTCTTGCTCTGTCTGCAACAAAACCTTCAACCGTTTCAACAACATGCAGATGCATATGTGGGGACATGGATCGCAGTACAGGAAAGGACCAGAATCACTGAGAGGGGCAAAACCAGCGTCTTCAATTCTGAGACTGCCATGTTATTGTTGCGCCGAAGGTTGTCGGAACAACATCCAGCATCCGAGGTCGAGGCCGTTGAAGGATTTCAGGACACTTCAGACACACTACAAGCGCAAGCACGGCGCCAAGCCCTTCGGCTGCCGGAAGTGCGGCAAGGCGTTCGCCGTCAGAGGAGACTGGAGGACCCACGAGAAGAATTGCGGCAAGCTCTGGTTTTGTATCTGTGGCTCTGATTTTAAGCACAAAAGATCCCTCAAAGACCACGTTCGAGCCTTCGGTGACGGCCATGCTCCTCACACCGTCGATAGCCGGGACCACCACCACCACCACGAGTTAGAAGAAGTCGACGATGATGAAGACGAAGACGAAGAATTAGAAGATGATGATAATAACAGTGACGTGTTTGTCTACAGCGGAAATCATGCCTCCATTTACTTCTGA 957 0.5037 MQNQYPNFSLCLEPEEQDEHSISLSLGPPGQHNISSNKVNSTVTTTCSSSNDVVSLHHHHLLHHQNPNSDLGVTVALHIGLPASPTTNTAGGGGSNGNKPDPLMSSSSSSGHVSGQYWIPSPAQILIGPTQFSCSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGAKPASSILRLPCYCCAEGCRNNIQHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKAFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVDSRDHHHHHELEEVDDDEDEDEELEDDDNNSDVFVYSGNHASIYF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0467 318 SUPERFAMILY beta-beta-alpha zinc fingers 128 153 IPR036236 -
Alju09g0467 318 ProSitePatterns Zinc finger C2H2 type domain signature. 134 154 IPR013087 -
Alju09g0467 318 Gene3D Classic Zinc Finger 175 264 - -
Alju09g0467 318 ProSiteProfiles Zinc finger C2H2 type domain profile. 217 237 IPR013087 -
Alju09g0467 318 MobiDBLite consensus disorder prediction 268 308 - -
Alju09g0467 318 PANTHER ZINC FINGER PROTEIN WIP2 32 291 IPR043584 GO:0003700|GO:0010468
Alju09g0467 318 MobiDBLite consensus disorder prediction 268 286 - -
Alju09g0467 318 FunFam Zinc finger protein WIP2 186 268 - -
Alju09g0467 318 Gene3D Classic Zinc Finger 131 154 - -
Alju09g0467 318 ProSiteProfiles Zinc finger C2H2 type domain profile. 132 159 IPR013087 -
Alju09g0467 318 MobiDBLite consensus disorder prediction 84 111 - -
Alju09g0467 318 MobiDBLite consensus disorder prediction 287 303 - -
Alju09g0467 318 SUPERFAMILY beta-beta-alpha zinc fingers 200 237 IPR036236 -
Alju09g0467 318 SMART c2h2final6 180 212 IPR013087 -
Alju09g0467 318 SMART c2h2final6 132 154 IPR013087 -
Alju09g0467 318 SMART c2h2final6 217 237 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0467 Alju-ChrAlju09 6723100 6724615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0467 18 276 C2H2 Transcription Factor Family AT1G13290 69.615 1.83e-122 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju09g0467 None None None