Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0463 ATGTCTCATTCCGCAATAGGCTTGAACTTCCCTTCCACACCTTCTCCGCCGGGCAAGGCGTACACCACGTCGCCGGTGATCGTAGCTTTCGCGCTCGGCGTCTTCATATGTCTCATAGTAGGTGTCTGCTTAATCTACTTTTGCCGATGTTTCGTCATTAATTGCATTTACGCCCGGGCCTTCCGTCGTCCCACCGTCAACAACCTCCTCCGCCGCCAGATCCATTCCCCTAACCACGATGCCAACGCTAACGCCGCCGCGGCTTCTCCGATTCCCGGCATCGACCCGGTGCTGCTCCAAATCTTTCCCACCTTCCCCTACGCCTCCGTGAAGGAGTTCCAAAAAAAGAACAATAATAACAAAAGCTACAGCCTAGAATGTGCGATTTGCTTGTTGGAATTCGAGGAAGATAGTTTCCTTCGCCTATTAACCTTTTGCTGCCATGTTTTTCACCAAACATGTATCGATCTCTGGCTTGAATCTCACAAGACATGCCCTGTTTGTCGCACAGATCTTGATTCCTCGTCAAAGGAAAAACATGAAGATCAAAATCACACAATCATAGCAGACAATAATCCCCACGACGACGACGACAACGACAACGAGACACGAATCGATGTAAGGGAAGAAGACGAAGAAGAAGAAGAAGAAGAACGGGTTTCAGGGAGAAGAGAAGAAGAGGATGAAGAAGAAGAAGAAGAAGAAGAAGGTGTTTCAGGGGAAGGAGATCAAGAGAAGAGATTTTCTAAGTCACATTCAACGGGTCATTCTATAGTGGTGATAAAAGACGACGACGACGATAAGAAGGAGAATAATAAAGAAGATAAGTATACGTTGAGATTACCAGAACATGTTAGGATGAAATTGATGAGGGGACACAATAATCACACATCAAAGAGTTGTGAATCTTACATGGAGATGACCAGACTTTGTAGTAAATGTTGCTACATTGAGGCCATGTCGTCCTCGTCATCTGCTTGTTGCGCCGTCACCACCACCACCACTACTTCCACCTGCGAACCTTTAAGGGTTTGA 1035 0.4657 MSHSAIGLNFPSTPSPPGKAYTTSPVIVAFALGVFICLIVGVCLIYFCRCFVINCIYARAFRRPTVNNLLRRQIHSPNHDANANAAAASPIPGIDPVLLQIFPTFPYASVKEFQKKNNNNKSYSLECAICLLEFEEDSFLRLLTFCCHVFHQTCIDLWLESHKTCPVCRTDLDSSSKEKHEDQNHTIIADNNPHDDDDNDNETRIDVREEDEEEEEEERVSGRREEEDEEEEEEEEGVSGEGDQEKRFSKSHSTGHSIVVIKDDDDDKKENNKEDKYTLRLPEHVRMKLMRGHNNHTSKSCESYMEMTRLCSKCCYIEAMSSSSSACCAVTTTTTTSTCEPLRV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0463 344 Pfam Ring finger domain 126 169 IPR001841 -
Alju09g0463 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 177 IPR013083 -
Alju09g0463 344 MobiDBLite consensus disorder prediction 171 275 - -
Alju09g0463 344 MobiDBLite consensus disorder prediction 240 275 - -
Alju09g0463 344 MobiDBLite consensus disorder prediction 202 239 - -
Alju09g0463 344 FunFam E3 ubiquitin-protein ligase ATL6 82 175 - -
Alju09g0463 344 SUPERFAMILY RING/U-box 126 174 - -
Alju09g0463 344 SMART ring_2 127 168 IPR001841 -
Alju09g0463 344 ProSiteProfiles Zinc finger RING-type profile. 127 169 IPR001841 -
Alju09g0463 344 MobiDBLite consensus disorder prediction 172 201 - -
Alju09g0463 344 PANTHER RING FINGER DOMAIN-CONTAINING 25 180 - -
Alju09g0463 344 Coils Coil 210 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0463 Alju-ChrAlju09 6667006 6668040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0463 12 291 Rapid Response to Elicitors AT3G05200 31.206 1.22e-28 112