Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0448 ATGGCTTCCGATACACATGGCTCCCGTCGTAAGCACCGGCGTTCGTCTTCTCCGGAAGAAGTCGAGCGATCTTCGAAGCGTCACAAGCACCGCCATGGTCACCGCCATCATCGGCACCGCCACGGGAGCAGGAAACGCGAAGAAGAGCTTGAACTAGATACTGAAACTGTTGATAAGGTTCCTTCTCCAACTCCTGCTCCTAATTTTGATGCGAAGATCCCTAGGCCTGATGATGATGTGGAGGAGGGGGAGATTCTTGAAGAAGAGGGCTCCGGTGGCCGAGATGGTGAGATTCGAAAAAAGCATACGGAGTCCGATGCTGAGTCTGGTGAAATTATGGCCACGGAAGGTCGAGGTATTCGATCTGACAATTCAAATCCGGTACATTTCACTGAAGAGATTTTGCATCATAAAGATGCCATTCCTTCTAAGGAGATAGTAGGGATCAATGGTAAAGGTACAGAAACTAATAATGAGAATATCAGCAATGGTAAATTTATTAGTCCAGGATTGGATGGAGAAGATGATACTTGCCATCAGAGGCACACTGGTTATAGGAGAAATGAAGTTGATGGTTCTTCTACCCATTCAAGTGCTGAGTCTCTAGATGGTAAGCGTGCTAGAGCTAGTTCAGATGGTTTGGGCAATGGGCATTTGGACCGTAAATCTTCCAAAGAGGATAAATGGCAGCATGGGGAGCTTGGATGTTTTAAAGAAAATGAGAAGCTGAAAGGTGACTATGATAATGAAGTTAATGAAGGCAAAGTAAGGATTCATAGAAAGAACTCCTCCCCTGAAAGTGGAGGCGGCAAATATAGGACCAGGGATAGCTCACCTAGTTATAGGTGTAGGAGTCGATCCAGATCTAGTGGTCATACTCATAATGTAGTAGAAGAATATGCTCATTCCAGGAGAAGGAATGATGAGGAAAGAATTGGGGAGTTTGGCAGGGAGCGTGGACATGTTAGTACATATTTGATGGCAGGTGACAGAGGGGAGCGTCAGGAGGCCTGGGATAGAGGCAGGAGCAAGGACAGGGATGGGGATAGGGACCTAAGAAGGGAAAAGGAACGAGAAAGGAGCTGGAATAGGGAGGATGACCATGTGCGTAGGAGGGAAAAAGAACGTGAAAAGAGTCATGAGAAGGATAGAAGGGATGTAGAAAAAGATAGGAGCAGGGGAAGAGAGGTGGACAGGGATAGAAGAAGAGAAAAGGAGAGAGATAGAGATAGGAGCTGGGAGACAGTGGTTGAGCGGGGTAGAATTGATAGGGGAAGAGAGAGGAGCAGGGACAGAGCAAGGGCTGGAGAGAGGGATAGAGTCCGGGGGAGTGAAAGGGATGATAAGCATCGAGAAAGAGATAAGATTAGGGAGAGGGAGAGGGAGAGGCACAAGGATAGAAACACTCTTGATAAAGATAAAAATCTGGGTTATGAGCATGGTAATGAGTGCCGGGTCAGAGATATGCGCTTTAGTCATTCAAGGCATGAAGAAGCAGAAAGCCATCGGGAGAGAAAAAGAAATTCTGAGTCTGTGAAAGTTGATAACCATATGGACAGAGGTGAGGATGAACAGGATGACTTAGATGAGACAGCTACGTTGCCATTTGCTGAGCAAGAAGAGGAAGATCTGAATAGGATTAAGGAGGAGAGTAGGAGGAGGAGGGAAGCAATTTTAGAGAAATATAAAAAGCAGCCACCGCAGCAGCATCAACAAGCAGAACAAACTTCTGAAAATAAAGAAAAAGATATGGATCCTGTGAATATTCCAGCTGCTGTTTCTGAAGCTCCTGATGCTATGAATGATGGTATTGATGTTTTTGAAGCGGAACCATCTTTTGCTGTTGGTAAATCTCCTAGAGAAAATGGGAATGATGCGTCTGAGAAGATCCCTGGTGTTACACGGCGCTTGGGAGAGGGCACTCCAAAGAGTGAAAGGTCCGATGATGAATTCTGTGATGACATATTTGGTGAGACACCAACAGGAGTTCACAGAACGGGCAAAGGGGATGGATTGCGTGTTGACAGGGGTGGATTGCATGACAATTGGGATGATGCGGAGGGGTATTACAGCTATCGTTTTGGTGAGATACTTGATGGTCGATATGAAGTTATAGCAGCTCATGGTAGAGGTGTCTTTTCGACAGTTGTTCGTGCAAAGAATCTCAAGTCTGGTAATGGTGAGCCAGATGAAGTAGCTATAAAAATTATTCGTAATAATGACACTATGTACAAGGCTGGTATGGATGAGTTGGTCATACTAAAGAAATTAGTAGGTGCAGATCCAGATAATAAGCGTCATTGTGTTCGTTTCCTTTCGAGTTTTAAGTACAGGAATCACCTTTGTTTAGTTTTTGAATCTCTATATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAATCTAAAAGGTGTGCAATCGTACGCAAAACAACTTTTCATTGCATTGAAGCATCTTCGGAACTGTGGCGTTCTTCATTGTGATATAAAGCCTGACAATATGTTGGTGAATGAGGCTAAAAATGTGTTGAAGCTTTGTGACTTTGGTAATGCTATGTTTGCTGGAAAGAATGAAGTTACACCATATCTTGTGAGTCGGTTTTATCGTGCCCCTGAAATAATACTTGGCTTGGCATATGATCATCCGTTGGATATGTGGTCTGTAGGCTGTTGTTTGTATGAACTCTATACTGGAAAAGTTCTTTTCCCAGGTCATACTAACAATGACATGCTACGGCTTCACATGGAATTGAAGGGCTCTTTTCCAAAGAAGATGCTTCGTAAGGGAGCTTTTGTTGATCAACACTTTGACCAAGATTTGAATTTTCTTGCTACAGAAGAGGATCCAGTGACGAAAAAAGCTATAAAGCGGTTGATTCTCAACATGAAGCCCAAAGATATTGGAACTATCATTGCTGGCTCTCCTGGAGAGGAGGCGGATCGAAAGAAGCTAGCCAATTTCAAAGATCTTCTGGACAAGATTTTTGTCCTGGATCCAGAGAAGAGATTGACAGTCTCACAAGCATTAAGCCACCCATTCATCACTGGCAAGCGTCCACTTTACAGGCGGTTCTTTCAGTGGAATGTACTGTTTCTATTGAGACATCAATGCTGTGAGGCAACCCTCCAGTTCTTAGATGCTTTAAAGGCACTCAGGAGAAGCATCTTTGTATTATTGTTTCAATTATTTCTTAAATTTGAATTCGAATTTATGCAAATCCTAATGAAATTGCGTTGCATCTTATCCATGGCCTGGTCATTCTGGAGGCATTTTCCACTGGAGGTGTTTGGCTGTGTTCTTGAAGGGAATTCTTACCTCAGGGGGTACAGTATCTTTGGTCCTGCTATTTTTGTAAGTATATTCATGTCCAACTTAACTTTCTCTTATTGTCTGCATTCATGTGACTGCTGA 3426 0.4361 MASDTHGSRRKHRRSSSPEEVERSSKRHKHRHGHRHHRHRHGSRKREEELELDTETVDKVPSPTPAPNFDAKIPRPDDDVEEGEILEEEGSGGRDGEIRKKHTESDAESGEIMATEGRGIRSDNSNPVHFTEEILHHKDAIPSKEIVGINGKGTETNNENISNGKFISPGLDGEDDTCHQRHTGYRRNEVDGSSTHSSAESLDGKRARASSDGLGNGHLDRKSSKEDKWQHGELGCFKENEKLKGDYDNEVNEGKVRIHRKNSSPESGGGKYRTRDSSPSYRCRSRSRSSGHTHNVVEEYAHSRRRNDEERIGEFGRERGHVSTYLMAGDRGERQEAWDRGRSKDRDGDRDLRREKERERSWNREDDHVRRREKEREKSHEKDRRDVEKDRSRGREVDRDRRREKERDRDRSWETVVERGRIDRGRERSRDRARAGERDRVRGSERDDKHRERDKIRERERERHKDRNTLDKDKNLGYEHGNECRVRDMRFSHSRHEEAESHRERKRNSESVKVDNHMDRGEDEQDDLDETATLPFAEQEEEDLNRIKEESRRRREAILEKYKKQPPQQHQQAEQTSENKEKDMDPVNIPAAVSEAPDAMNDGIDVFEAEPSFAVGKSPRENGNDASEKIPGVTRRLGEGTPKSERSDDEFCDDIFGETPTGVHRTGKGDGLRVDRGGLHDNWDDAEGYYSYRFGEILDGRYEVIAAHGRGVFSTVVRAKNLKSGNGEPDEVAIKIIRNNDTMYKAGMDELVILKKLVGADPDNKRHCVRFLSSFKYRNHLCLVFESLYMNLREVLKKFGRNIGLNLKGVQSYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLAYDHPLDMWSVGCCLYELYTGKVLFPGHTNNDMLRLHMELKGSFPKKMLRKGAFVDQHFDQDLNFLATEEDPVTKKAIKRLILNMKPKDIGTIIAGSPGEEADRKKLANFKDLLDKIFVLDPEKRLTVSQALSHPFITGKRPLYRRFFQWNVLFLLRHQCCEATLQFLDALKALRRSIFVLLFQLFLKFEFEFMQILMKLRCILSMAWSFWRHFPLEVFGCVLEGNSYLRGYSIFGPAIFVSIFMSNLTFSYCLHSCDC 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0448 1141 MobiDBLite consensus disorder prediction 522 537 - -
Alju09g0448 1141 FunFam Serine/threonine-protein kinase PRP4 homolog 762 1020 - -
Alju09g0448 1141 MobiDBLite consensus disorder prediction 332 521 - -
Alju09g0448 1141 MobiDBLite consensus disorder prediction 614 652 - -
Alju09g0448 1141 MobiDBLite consensus disorder prediction 539 563 - -
Alju09g0448 1141 FunFam serine/threonine-protein kinase PRP4 homolog 673 761 - -
Alju09g0448 1141 MobiDBLite consensus disorder prediction 218 266 - -
Alju09g0448 1141 ProSiteProfiles Protein kinase domain profile. 702 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0448 1141 SMART serkin_6 702 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0448 1141 MobiDBLite consensus disorder prediction 146 587 - -
Alju09g0448 1141 Pfam Protein kinase domain 703 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0448 1141 Coils Coil 537 557 - -
Alju09g0448 1141 Coils Coil 370 390 - -
Alju09g0448 1141 MobiDBLite consensus disorder prediction 1 127 - -
Alju09g0448 1141 MobiDBLite consensus disorder prediction 172 189 - -
Alju09g0448 1141 SUPERFAMILY Protein kinase-like (PK-like) 689 1032 IPR011009 -
Alju09g0448 1141 MobiDBLite consensus disorder prediction 291 318 - -
Alju09g0448 1141 MobiDBLite consensus disorder prediction 87 111 - -
Alju09g0448 1141 Gene3D Transferase(Phosphotransferase) domain 1 762 1020 - -
Alju09g0448 1141 Gene3D Phosphorylase Kinase; domain 1 673 761 - -
Alju09g0448 1141 MobiDBLite consensus disorder prediction 27 43 - -
Alju09g0448 1141 MobiDBLite consensus disorder prediction 150 165 - -
Alju09g0448 1141 CDD STKc_PRP4 701 1019 IPR044092 GO:0004674|GO:0006468|GO:0045292
Alju09g0448 1141 ProSitePatterns Serine/Threonine protein kinases active-site signature. 829 841 IPR008271 GO:0004672|GO:0006468
Alju09g0448 1141 PANTHER DUAL SPECIFICITY PROTEIN KINASE 396 1020 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0448 Alju-ChrAlju09 6492674 6501309 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0448 698 1026 MAP Kinase Gene Family AT1G10210 30.973 2.32e-28 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Alju09g0448 Pkinase 2.4e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g0448 09 6492674 6501309 Alju09g0448 09 6492674 6501309 ECH