Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0446 ATGGAGAGACTGGCGTCGACGAAGGCCACGACGTCTTGTGGGTATCTGAGCTGGCAGGAGGTGTTCGTCTCCGAAGGCGAAAGCAAGGGAAGGAAGGAGGTGCGGTATTTTCTCAAAAGAAGCGATGGCAGCTCAGATCTGGCCGTGGTTGGGAGAGAAAAGAGCACGAGGCATATGTCTTATAACTATTCTATTAGAGATGAGGTCCTTGCCTTCATTGGGTCGTTGACCCCGTCGCTATTGAAGCTCAAATCACGCCGAGATGTTATTGATTGGTTGAATTCCATTGTTTCAGATTCACAACGCGAGGGTGCGTCTATCAGGGAACAAAAAGGTGGCAGTGGATACAACATGGTAGCCTTGAAGGATAATCGATTGCGGAAGCTGGGCCATTGTATAAAAGAGTTCTCATGGTCAGGGTCTTCGTGGACTTGTAAGAAACGAAGAAAGCACTATAAGTCATTTAGATGGAATGATTTAAAGATATCCGTTCATGATTTCGTATATGTTTTAGCAGAAGAAGATAAGCGTCTCGTTGCCTACCTGGAAGACATGTATGAGGACTCCAGAGGCAATAAGATGGTTATGGTACGCTGGTTTCACAAAATTGACGAGGTTGGTAATTTTTTGCCTCACAGTTTTAGTGACAGAGAGATATTCTTTTCTCTTTGTCTTCAAGATCTGAGCATCGAATGCATAGATGGATTGGCTACTGTACTCAGCCCCCAGCATTACGAAAAGTTTCAGAACGAAGCAAGGCATACTATGTTGGAACCATTTGTCTGCGACAATCAATTTGACAATGAAGATGTTAAGCACTTTGATATAACTCAAGTTAAAGGTTACTGGAGACAGGAAATCCTCAGATATATGTATACCCATTCTGACGCAAAATCTAATGGAAGTTCTCAGCAATCTGATGATAAACTGGAAGAAGAGGACATCCAGTTTACGTCCAGGATAAGACCTAAAAAGAGACTGCGCCGGGCAAAAGTTGATGGTGAAGGTGCTGCTATTGAAACGGGAAGTTTGAATGATAGTGGAAATGAAGCTAAACGAAAAAATGGAAACAGTTCCTTGAAACAAGTTGGCCCCTCAGCCAGCAAAGACACAAAAGAAAACGATTTAGAGTATTTAGCTATAGGTTCTCAGGTTGAGATCCTCTCTCAGGACAGTGGCATTAGAGGCTGCTGGTTTAGAGCTTCGGTCATAAAGGAGCACAAAAATAAAGTGAAGGTGCAGTATCAAGACCTTCAGGATGCAGTTGATGAATCTAGGAAGCTTGAGGAATGGGTTTCTGCGTCTAGAATTGCGGCTCAGGACCACTTGGATATCCGACTGAATGGACGGTCTACCATACGCCCAGCCCCTCAGTCTAGTCTGTATAAATTTTCTGGGGTGGTTGGTTCCATTGTGGATGTCTTGTGGCATGATGGTTGGTGGGAAGGCATCATTGTTCAGAAAGAGTCTGAAGCTAAGTGTCATGTTTATTTCCCAGGGGAGAAGTTAGTGTCAATATTCGGATCTGGTGACTTGAGACGAGCTCAAGAATGGACAGGGAGTGGGTGGTTGAACGTAAAGGAAAGGCCTGACCTTGTTAGTTCTATATTATCCAGATTAAAAACATCACAAGATCCCAGCAAATCGGCTGCAGCTGCATCTGCCGGAGATGCCGGACATTCAAAGCAAGGTGGGAATAATAATAGTGCAAATCCTGAAAGTGATAGTAAATCAAGAAAGCCCGAGTGGGTTCCAGACCTTTCAAAGGACGATATCCTGTCTCAGTTAAGATGGAAGTCATCCAGGAAGAGAGGCCGAAGCCACGGCAGAAAGTCCCCGGATTCCTCAGACCCCCATGCTTCTGACAGTTATGTGATCTCAGCATCTTTAAAAGTGGTTGATCATGACGACTGCAAATACAGCAGGGGGGATCAAGCCATGTTCAACTCTTCAGTGGTGCCCTCTTTAACTACTAACTTGGTCATGTGTAGGTGA 1995 0.4456 MERLASTKATTSCGYLSWQEVFVSEGESKGRKEVRYFLKRSDGSSDLAVVGREKSTRHMSYNYSIRDEVLAFIGSLTPSLLKLKSRRDVIDWLNSIVSDSQREGASIREQKGGSGYNMVALKDNRLRKLGHCIKEFSWSGSSWTCKKRRKHYKSFRWNDLKISVHDFVYVLAEEDKRLVAYLEDMYEDSRGNKMVMVRWFHKIDEVGNFLPHSFSDREIFFSLCLQDLSIECIDGLATVLSPQHYEKFQNEARHTMLEPFVCDNQFDNEDVKHFDITQVKGYWRQEILRYMYTHSDAKSNGSSQQSDDKLEEEDIQFTSRIRPKKRLRRAKVDGEGAAIETGSLNDSGNEAKRKNGNSSLKQVGPSASKDTKENDLEYLAIGSQVEILSQDSGIRGCWFRASVIKEHKNKVKVQYQDLQDAVDESRKLEEWVSASRIAAQDHLDIRLNGRSTIRPAPQSSLYKFSGVVGSIVDVLWHDGWWEGIIVQKESEAKCHVYFPGEKLVSIFGSGDLRRAQEWTGSGWLNVKERPDLVSSILSRLKTSQDPSKSAAAASAGDAGHSKQGGNNNSANPESDSKSRKPEWVPDLSKDDILSQLRWKSSRKRGRSHGRKSPDSSDPHASDSYVISASLKVVDHDDCKYSRGDQAMFNSSVVPSLTTNLVMCR 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0446 664 SMART agenet_At_2 377 443 IPR014002 -
Alju09g0446 664 SMART agenet_At_2 464 520 IPR014002 -
Alju09g0446 664 MobiDBLite consensus disorder prediction 575 598 - -
Alju09g0446 664 CDD Tudor_Agenet_AtDUF_rpt1_3 379 437 - -
Alju09g0446 664 MobiDBLite consensus disorder prediction 560 574 - -
Alju09g0446 664 MobiDBLite consensus disorder prediction 338 371 - -
Alju09g0446 664 Pfam BAH domain 161 270 IPR001025 GO:0003682
Alju09g0446 664 Gene3D - 132 276 IPR043151 -
Alju09g0446 664 Pfam Agenet domain 382 457 IPR008395 -
Alju09g0446 664 Coils Coil 404 428 - -
Alju09g0446 664 MobiDBLite consensus disorder prediction 342 367 - -
Alju09g0446 664 ProSiteProfiles BAH domain profile. 160 277 IPR001025 GO:0003682
Alju09g0446 664 SMART BAH_4 160 277 IPR001025 GO:0003682
Alju09g0446 664 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 368 600 - -
Alju09g0446 664 MobiDBLite consensus disorder prediction 296 315 - -
Alju09g0446 664 MobiDBLite consensus disorder prediction 543 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0446 Alju-ChrAlju09 6477880 6481036 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0446 389 518 PHD Transcription Factor Family AT5G58610 30.882 2.04e-06 49.3