Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0416 ATGTCTTCCACAGCTACAAAACCAGAGATTGGGTCTAATGAAGAAGAAGCTGAGCTCAGAAGAGGACCTTGGACTCTGGAAGAAGACAGTTTACTCATACACTGTATCGCTCTTCATGGCGAAGGTCGTTGGAACATGTTAGCCAAAACTGCAGGATTGAAGAGAACAGGAAAGAGTTGCAGATTGAGGTGGCTCAACTACTTGAAACCAGACATCAAGAGAGGGAATCTAACTCCACAAGAGCAACTTTTGATCCTCGAACTCCATTCCAAATGGGGCAACAGGTGGTCAAAAATTGCTCAGCATCTGCCAGGAAGAACAGACAATGAGATCAAGAATTATTGGAGGACAAGAGTTCAGAAACAGGCACGTCAGCTAAACATTGAGTCTGGTAGTGACAGATTCATCGATGCTGTTCGATGTTTCTGGATGCCTAGGTTGTTACAAAAGATGGAACAAAACTCTTCATCTTCCTCTTCCTCTGTCATCAACATGAACTCTGAGAATTCCCTGTCTCCTCCTCAAGGAGAATTCACAGATGTTGCAGCAAATCACACAAGCACAACCACCACCACCTACAACAACAATAATTATAATCTTAATTTCCCAGATCATTGTTCTCTGCATTTACAAGAACCGTCGTTTGAAATATCGGATAACCCGACAAGTACTGCTCTTATTCCTCAAGTGTTGGAGAACTACAACAACAACAATGTTTGGTTCAATAATCCAGTTCAAGATCGTAGTTATGGCATGGAAGGGCTAAACTTGGAGCCATTTTCTTCAAGAACTGAGAGTAATAATTATGGGATTCCCCAGTTTGATTATAATTGTCAGAGTTCAGAAAGTGATCAGTGGTTGTTAAGCAGCTTGGGAGAATATTCTTTGTGGAACTTGGATGATATGTGA 909 0.4158 MSSTATKPEIGSNEEEAELRRGPWTLEEDSLLIHCIALHGEGRWNMLAKTAGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIESGSDRFIDAVRCFWMPRLLQKMEQNSSSSSSSVINMNSENSLSPPQGEFTDVAANHTSTTTTTYNNNNYNLNFPDHCSLHLQEPSFEISDNPTSTALIPQVLENYNNNNVWFNNPVQDRSYGMEGLNLEPFSSRTESNNYGIPQFDYNCQSSESDQWLLSSLGEYSLWNLDDM 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0416 302 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Alju09g0416 302 SMART sant 73 121 IPR001005 -
Alju09g0416 302 SMART sant 20 70 IPR001005 -
Alju09g0416 302 MobiDBLite consensus disorder prediction 1 20 - -
Alju09g0416 302 CDD SANT 78 117 IPR001005 -
Alju09g0416 302 Gene3D - 18 74 - -
Alju09g0416 302 FunFam MYB transcription factor 78 141 - -
Alju09g0416 302 FunFam Myb transcription factor 21 73 - -
Alju09g0416 302 Pfam Myb-like DNA-binding domain 74 117 IPR001005 -
Alju09g0416 302 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Alju09g0416 302 SUPERFAMILY Homeodomain-like 19 115 IPR009057 -
Alju09g0416 302 CDD SANT 23 68 IPR001005 -
Alju09g0416 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Alju09g0416 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 68 IPR017930 -
Alju09g0416 302 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Alju09g0416 302 MobiDBLite consensus disorder prediction 155 174 - -
Alju09g0416 302 Gene3D - 77 119 - -
Alju09g0416 302 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 15 189 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0416 Alju-ChrAlju09 5997215 5998443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0416 16 160 MYB Transcription Factor Family AT1G68320 82.759 2.42e-86 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju09g0416 Myb_DNA-binding 1.2e-14 CL0123