Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0411 ATGGAGGACCACCAAATACTCTTCCCTTCTAAACCAACAAACCCTTTGAAGCTTTTCGGCTTCAGCGTCCACCACAACAACGTGCTCCAAGTTGAAGAAGACGAAGATGTCTCTGCAGGCCCAATCTCCAAGCCCACTTCTCCATCTGGATCACCGGATTCCCCCGTATCCGCCGGCGCCGGAGGAACTTTCCCCGCTTCCTCTGGCGGCGACAGGAAATACGAGTGTCAGTATTGTTGCCGCGAGTTTGCCAACTCGCAGGCCCTCGGTGGTCACCAGAACGCTCACAAGAAAGAACGGCAGCAGCTGAAGCGGGCCCAGTTACAAGCCTCACGAAACGCCGCCGTTTCGTTCGTTAGGAACCCGATAATCTCCGCCTTCGCCCCTCCGCCTCATTTACTTTCTCCGGCGGGCCACGTCATGGTTCCGGCAGCCACTCCGTCGTCCTGGGTCTATGTTCGGCCGCGTACCGCTCCTCCGCCGTTCCACGTGTCAGTATCACACGGGTGCGTGTTCCCTTCGCCGACTAATAGCACTATCTGTAGTCAGAGTGGGAGATCGGCGGGCGGCGGGATGTTATCCTGTGGTGGCAGCGCTGGGGAGTCCATGGGGTCTCACGTACATGGTAGGGCCCATGGGCCATCTTTAAGTAGATTTTCCAAAGGTGATGGTGGTCCCAACTTCGATGACCCATTGGGCTTGGACTTGCATCTAAGCCTTGCGCCTGCTGCGCCGTGA 738 0.5759 MEDHQILFPSKPTNPLKLFGFSVHHNNVLQVEEDEDVSAGPISKPTSPSGSPDSPVSAGAGGTFPASSGGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVSFVRNPIISAFAPPPHLLSPAGHVMVPAATPSSWVYVRPRTAPPPFHVSVSHGCVFPSPTNSTICSQSGRSAGGGMLSCGGSAGESMGSHVHGRAHGPSLSRFSKGDGGPNFDDPLGLDLHLSLAPAAP 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0411 245 FunFam Zinc finger protein 6 63 124 - -
Alju09g0411 245 SUPERFAMILY beta-beta-alpha zinc fingers 70 101 IPR036236 -
Alju09g0411 245 MobiDBLite consensus disorder prediction 198 224 - -
Alju09g0411 245 MobiDBLite consensus disorder prediction 33 69 - -
Alju09g0411 245 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 101 IPR013087 -
Alju09g0411 245 PANTHER ZINC FINGER PROTEIN 5 12 244 IPR044299 GO:0010090
Alju09g0411 245 ProSitePatterns Zinc finger C2H2 type domain signature. 76 96 IPR013087 -
Alju09g0411 245 MobiDBLite consensus disorder prediction 42 56 - -
Alju09g0411 245 Gene3D Classic Zinc Finger 65 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0411 Alju-ChrAlju09 5893838 5894575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0411 5 243 C2H2 Transcription Factor Family AT1G68360 47.191 5.80e-54 172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g0411 09 5893838 5894575 Alju09g0411 09 5893838 5894575 ECH