Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0410 ATGGGTTCTAAGATGGAAGGACCGTCTGCCCCAGCAATTCGACGAGATCCATATGAGGTATTGTCTGTGTCAAGGGACGCAAGTGATCCGGAGATAAAAACTGCTTACAGAAAGCTCGCCCTCAAGTATCACCCTGACAAAAATGCTGACAATCCTGCAGCTTCAGAACTCTTTAAAGAGGTTGCATTTTCATACAGTATCTTGTCTGACCCAGAGAAGAGAAGGCAATATGACAGTGCTGGATTTGAGGCGCTTGAAGCAGACAGCATGGACATGGAAGTTGACTTGTCCAATCTTGGAACTGTCAACACAATGTTTGCAGCTTTGTTCAGCAAGCTGGGTGTCCCTATCAAGACCACCATTTCAGCTAATGTTCTTGAAGAAGCTCTGAATGGCACAGTTACTGTCAGACCCCTTCCAATTGGAACCTCAGTTAGTGGAAAGGTGGAGAAGCAAGGTGCTCATTTCTTTGGTGTGACAATAAACGAGCAGCAAGCTGAGTCAGGTGTTGTAATAAGAGTCACGTCAACTGCACAAAGCAAATTCAAGTTGCTCTACTTTGAACATGATGTAAATGGTGGCTATGGCCTAGCATTGCAGGAAGACAGTGAAAAGACTGGCAGGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTACAGATTGGATTCAACTGTGAATGGTTTAGCAATGGCAAAGGATCCTGAAGGTGCCTTCTTCAAAAGATTGGAAGGTCTTCAACCTTGTGAAGTTTCGGAACTAAAGCCTGGCACTCATATATTTGCAGTTTATGGAGATAACTTCTTTAAGACTGCCTCCTATACCATTGAGGCGCTTTGTGCAAAGTCCTATGAGGATACCACCCAAAAACTTAAGGACATTGAGGCTAAAATTTTACTAAAGAGGAATGAGCTACGCCAATTTGAAACAGAATATAGAAAGGCATTGGCACACTATCAAGAAGTGACTGAAAGATACACCAAAGAAAAGCAAGAAGTAGACGAGCTTCTGAAGGAGAGAGATGGCATCCATTCTTGCTTCACTGTTTCCAGGCCAATCATTTCTAGTGGTAATGGTAGTAGTAATCTGAGTAATGGAAGTAGTAGCAAGAAATTTTCTGGTGAAGATTCCAAACAAGGGAGCCCCAAGGAAGATGGAAGCTCAGATGGGAAGGATAAATCTGGAAGAAAGAAATGGTTTAATCTCAATCTTAGTAGTTCTGGTAAGAGAATGTTTTGA 1245 0.4241 MGSKMEGPSAPAIRRDPYEVLSVSRDASDPEIKTAYRKLALKYHPDKNADNPAASELFKEVAFSYSILSDPEKRRQYDSAGFEALEADSMDMEVDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQGAHFFGVTINEQQAESGVVIRVTSTAQSKFKLLYFEHDVNGGYGLALQEDSEKTGRVTSAGMYFLHFQVYRLDSTVNGLAMAKDPEGAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEALCAKSYEDTTQKLKDIEAKILLKRNELRQFETEYRKALAHYQEVTERYTKEKQEVDELLKERDGIHSCFTVSRPIISSGNGSSNLSNGSSSKKFSGEDSKQGSPKEDGSSDGKDKSGRKKWFNLNLSSSGKRMF 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0410 414 MobiDBLite consensus disorder prediction 360 377 - -
Alju09g0410 414 SUPERFAMILY Chaperone J-domain 15 86 IPR036869 -
Alju09g0410 414 MobiDBLite consensus disorder prediction 360 414 - -
Alju09g0410 414 FunFam Chaperone protein dnaJ 16 2 98 - -
Alju09g0410 414 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 3 411 - -
Alju09g0410 414 SMART dnaj_3 15 73 IPR001623 -
Alju09g0410 414 PRINTS DnaJ domain signature 73 92 IPR001623 -
Alju09g0410 414 PRINTS DnaJ domain signature 18 36 IPR001623 -
Alju09g0410 414 PRINTS DnaJ domain signature 36 51 IPR001623 -
Alju09g0410 414 PRINTS DnaJ domain signature 53 73 IPR001623 -
Alju09g0410 414 Gene3D DnaJ domain 5 99 IPR036869 -
Alju09g0410 414 CDD DnaJ 16 70 IPR001623 -
Alju09g0410 414 MobiDBLite consensus disorder prediction 378 400 - -
Alju09g0410 414 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Alju09g0410 414 Coils Coil 286 341 - -
Alju09g0410 414 ProSiteProfiles dnaJ domain profile. 16 81 IPR001623 -
Alju09g0410 414 Pfam DnaJ domain 16 78 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0410 Alju-ChrAlju09 5872082 5878028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0410 9 88 C2H2 Transcription Factor Family AT1G74250 41.176 3.54e-11 63.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g0410 09 5872082 5878028 Alju09g0410 09 5872082 5878028 ECH