Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0406 ATGGCGGCAACCCTTTACTGTGCTACCTTCTTCTCTATACTTTTCCGTCTTCTTCTTCTTGTTCATAGCTCCAAAAACCCAGACTTTGAAGCTCTCATGGCGTTTAAAACAGATTCAGATACATTCAACAAGCTCTCGTCTTGGAACAACACCACTGACCCTTGTTCTTCGTGGTCCGGCGTCTATTGCCTCCATAACAGAGTCTCGCGTCTCGTTCTCGAAGACCTCGATCTCCGAGGCTCTTTCGAACCTTTAACTTCTCTAACCCATCTTCGAGTCCTGAGCCTGAAGCGAAACCGCTTCTCCGGCCCCATTCCGAGTCTCTCCAATTGCACCGCCCTGAAACTTTTGTACCTCTCTTACAATGAGTTTTCCGGCGGCTTCCCGGCGACTGTCACGTCGCTTTTCCGCTTGTACCGTCTTGATCTGTCTCACAATAACTTGTCCGGCGAGATTCCCGCCACGGTCAACCACATGACCCACATTCTCACTCTCCAACTTGACGAGAACCGTTTCTCCGGCAACATTCCCAGTCTTAACCTTCCCAACCTGCAAGACTTCAATGTCTCCGGGAATCGACTCTCCGGCGAAATACCCAAATCACTGTCGGGTTTCCCCGAATCCAGTTTCGGTCTAAACCCATCTCTCTGCGGAGCTCCGATTCAGAAATGCGCCAACTTTGTGGCCGAACCCAGCAAACCCGGATCTGAAGGAGCCATTGCGTCGCCATTAACGCCGCGAAGTAACCCACGAACACCAACAATATCATCCACACCGAGCTCAATGCCTTCAAACGAAGCAACACCTCCCAGAAAACCCAACTCATCGGCAAAAATAAGTCCCATAGCTCTAATTGCCATAATTCTCGGCGACATTGTGGTTCTCGGAGTGGTCACGCTTCTTCTGTACTGCTACTTCTGGCGAAACTACGCCGCAAAAATGAAAGAAGGAGGAAAAGGGTCGAAGCTAATGGAGACTGAGAAAATCGTTTACTCATCGAGCCCGTACCCGTTTCAGTCCGGTTTTGAGAGGGGTCGAATGGTGTTCTTCGAAGGGGTGAAGAAGTTCGAGCTTGAGGATTTACTCCGAGCTTCGGCGGAAATGCTCGGAAAAGGTGGGTTTGGGACGGCGTACAAGGCGGTTCTGGACGACGGCAGCGTCGTCGCCGTCAAGAGGCTGAAAGATGCTCAGATTGGAGGGAAGAAAGAGTTTGAACAACACATGGAAATTCTGGGAAGGATGAGACATCCAAATATTGTTCATTTGAGGGCTTACTATTTTGCCAGAGATGAGAAGTTGCTGGTCTCAGATTACATGCCTAATGGAAGCTTGTTCTGGCTTCTTCATGGGAACCGAGGACCTGGCCGGACCCCACTGGACTGGACCACAAGGCTTAAAATAGCTGCCGGAGCGGCGCGTGGGGTGGCTTTTATTCACAGCTCATGCAAATCCCTTAAACTCACCCATGGTAACATCAAATCCACAAACATCCTCCTCGACAAGGAGGGAAATGCACGCGTGGCAGATTTTGGGCTCTCCATCTTTACCGGTCCCGCCACCACGGCCGCTCCGAAATCTAACGGCTACCGTGCCCCGGAGGCCTTTGACGGTCGGAGATCCACTCCGAAATCCGACGTGTTCTCCTTTGGCGTTGTCCTGTTGGAGATTCTCACTGGGAAATGCCCCTCCAACGTGGACGGCGGTGGGTACGGTGGCAGTGCGGTGGTGGATCTTCCGAGGTGGGTACAGTCGGTGGTGAGGGAGGAATGGACGGCGGAGGTGTTCGATCTTGAGCTTATGAGGTACAAGGATATCGAGGATGAGATGGTGGGGCTACTTCAGATTGCTCTGTCGTGTACGGCCGCTGTGCCTGATCAACGGCCCAGCATGAGCCACGTGGTGAAGATGATCGAAGAGATTCGTGGGGTCGACGTGGGGCCCTCAAATGACACGTTGGACTCTGCGTCTGATTCCCCTTGTGTGTCTGAAGATGCTCCTTGA 2001 0.5217 MAATLYCATFFSILFRLLLLVHSSKNPDFEALMAFKTDSDTFNKLSSWNNTTDPCSSWSGVYCLHNRVSRLVLEDLDLRGSFEPLTSLTHLRVLSLKRNRFSGPIPSLSNCTALKLLYLSYNEFSGGFPATVTSLFRLYRLDLSHNNLSGEIPATVNHMTHILTLQLDENRFSGNIPSLNLPNLQDFNVSGNRLSGEIPKSLSGFPESSFGLNPSLCGAPIQKCANFVAEPSKPGSEGAIASPLTPRSNPRTPTISSTPSSMPSNEATPPRKPNSSAKISPIALIAIILGDIVVLGVVTLLLYCYFWRNYAAKMKEGGKGSKLMETEKIVYSSSPYPFQSGFERGRMVFFEGVKKFELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDAQIGGKKEFEQHMEILGRMRHPNIVHLRAYYFARDEKLLVSDYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGVAFIHSSCKSLKLTHGNIKSTNILLDKEGNARVADFGLSIFTGPATTAAPKSNGYRAPEAFDGRRSTPKSDVFSFGVVLLEILTGKCPSNVDGGGYGGSAVVDLPRWVQSVVREEWTAEVFDLELMRYKDIEDEMVGLLQIALSCTAAVPDQRPSMSHVVKMIEEIRGVDVGPSNDTLDSASDSPCVSEDAP 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0406 666 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 439 647 - -
Alju09g0406 666 FunFam pollen receptor-like kinase 1 337 438 - -
Alju09g0406 666 Pfam Protein kinase domain 367 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0406 666 SUPERFAMILY Protein kinase-like (PK-like) 367 638 IPR011009 -
Alju09g0406 666 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Alju09g0406 666 Gene3D Transferase(Phosphotransferase) domain 1 439 651 - -
Alju09g0406 666 Gene3D Ribonuclease Inhibitor 26 179 IPR032675 -
Alju09g0406 666 SUPERFAMILY L domain-like 37 205 - -
Alju09g0406 666 Gene3D Ribonuclease Inhibitor 180 225 IPR032675 -
Alju09g0406 666 MobiDBLite consensus disorder prediction 645 666 - -
Alju09g0406 666 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Alju09g0406 666 Gene3D Phosphorylase Kinase; domain 1 341 438 - -
Alju09g0406 666 FunFam Nuclear pore complex protein NUP107 25 178 - -
Alju09g0406 666 ProSiteProfiles Protein kinase domain profile. 363 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0406 666 CDD STKc_IRAK 369 640 - -
Alju09g0406 666 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 643 IPR046959 -
Alju09g0406 666 MobiDBLite consensus disorder prediction 235 276 - -
Alju09g0406 666 MobiDBLite consensus disorder prediction 242 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0406 Alju-ChrAlju09 5832047 5835258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0406 28 665 Receptor kinase-like Gene Family AT1G68400 66.052 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju09g0406 Pkinase 1.2e-38 CL0016