Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0396 ATGAGTAGTAATGGTAAATCTCATGGTGGTAATCAAAGCACCAGAGATGTCATCTGCAACGCGGGTGCTGGAGCTGCTGCTGGGGCTATAGCGGCTACATTTGTTTGTCCACTGGATGTAATCAAGACGAGACTACAGGTTCATGGCCTTCCTCCTGGGCAGAAAGGTAGTGTCATCTTCACAAGCTTACAGAATATTGTCAGGACTGAAGGTTTCAGGGGAATGTACCGTGGCCTTTCCCCAACAATAATAGCATTACTTCCAAACTGGGCGGTGTACTTCGCAGTTTATGGTCAACTGAAAGGCTTTTTCCTTTCACAAGATGGTTGCAACCAATTATCAACTGTTGAAAATATGGTAGCTGCTGCTGGTGCTGGGGCAGCAACAGCAATTTCAACAAATCCATTGTGGGTTGTTAAGACCAGACTTCAAACACAAGGAATGAGGTCTGATGTTGTTCCGTACAAAAGCATTCTTTCTGCTTTGACGAGGATAATGCATGAGGAAGGTATACGAGGACTGTATAGTGGCATAGTGGCTTCCTTGGCTGGTGTGAGTCATGTTGCAATTCAATTCCCTGCATACGAAAAGATCAAGTCATACATGGCGAAAAAGGATGATACAACTGTTGACAAACTTGGTCCAGGAAAGGTTGCCATTGCATCCTCAATTTCAAAAGTTATTGCCTCTGTAATGACTTACCCACATGAGGTGATACGTGCGAGGCTGCAGGAGCAAGGCCAAGCCAAATCTGCCGGGGTCCGGTATGCCGGTCTTGTTGACTGTTCTAGGAAGGTGTTCCAAACCGAGGGCCTTCCCGGCTTCTATAGAGGTTGTGTGACAAATTTACTAAGAACAACGCCATCAGCTGTAATTACATTCACCAGCTTTGAAATGATACACAGGTTTCTGCAACGTGTTGTGCAACAGGACATGGGGTCCTCACAAGGGTTTGGTAAACCAGATGATGATCTTAGCAAGCCCCAGCCAAAAGACAGTGACATAAAATTTGAAAACAACTCAGAGTGGAGGCAATCACCATCTGAGTCTAATAAGACAGCTTTAAATAAAGAGCAGCTATCTAGACACTGA 1092 0.4505 MSSNGKSHGGNQSTRDVICNAGAGAAAGAIAATFVCPLDVIKTRLQVHGLPPGQKGSVIFTSLQNIVRTEGFRGMYRGLSPTIIALLPNWAVYFAVYGQLKGFFLSQDGCNQLSTVENMVAAAGAGAATAISTNPLWVVKTRLQTQGMRSDVVPYKSILSALTRIMHEEGIRGLYSGIVASLAGVSHVAIQFPAYEKIKSYMAKKDDTTVDKLGPGKVAIASSISKVIASVMTYPHEVIRARLQEQGQAKSAGVRYAGLVDCSRKVFQTEGLPGFYRGCVTNLLRTTPSAVITFTSFEMIHRFLQRVVQQDMGSSQGFGKPDDDLSKPQPKDSDIKFENNSEWRQSPSESNKTALNKEQLSRH 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0396 363 Pfam Mitochondrial carrier protein 112 205 IPR018108 -
Alju09g0396 363 Pfam Mitochondrial carrier protein 18 106 IPR018108 -
Alju09g0396 363 Pfam Mitochondrial carrier protein 213 306 IPR018108 -
Alju09g0396 363 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Alju09g0396 363 Gene3D Mitochondrial carrier domain 3 109 IPR023395 -
Alju09g0396 363 Gene3D Mitochondrial carrier domain 110 317 IPR023395 -
Alju09g0396 363 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Alju09g0396 363 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Alju09g0396 363 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Alju09g0396 363 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Alju09g0396 363 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Alju09g0396 363 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Alju09g0396 363 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
Alju09g0396 363 SUPERFAMILY Mitochondrial carrier 15 299 IPR023395 -
Alju09g0396 363 MobiDBLite consensus disorder prediction 312 363 - -
Alju09g0396 363 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 16 309 IPR044712 GO:0006862|GO:0055085
Alju09g0396 363 MobiDBLite consensus disorder prediction 324 339 - -
Alju09g0396 363 MobiDBLite consensus disorder prediction 340 355 - -
Alju09g0396 363 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 16 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0396 Alju-ChrAlju09 5690917 5695589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0396 1 354 Chloroplast and Mitochondria Gene Families AT1G25380 63.361 3.83e-147 418