Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0384 ATGATTACGGTTTTTGACCAAGATCTGCACAAACGTTTGCAATCCAATGGTTCTTGTGATGCCTTCAATAACAATATCCCAATTCTTGCAAGCTCTCCTTTAATTTCTTTTGATATTAAATACAACATAACCCTGTTCAAATGCGGCCACAAACTCAATGTCAGCACCCCCACTGGTTTTATTAAACATACTTGTGGAAACTTTTATATCTATCATTACAGCCGACTCCTTGATCTTCAGCCTGACCAAAAAAGTCATTTCTCAGCATGTTCAACTCTTGTGCTTCCGAAAAAGGACCTTCCTGATAGCACAGACCTTCAGGCATTCTTATCTGCTCAAATGACTCTGGATGTACGATTATCTGATACTTGTGTTAAGTGTCACAACAGCGGAGGCCAGTGTCAACTTGACAGAAACAAGAACTTCTGCTACATCGAAGCTGCACGTGATAGGAGTAAAATTTGGAAGCTGGCAGTGGGACTTGGGCTAGGTTCATTTATTGGCCTTCTAGGCATTTTGATAACTTGGTGGCTACTAGGGCGTTATTACAAACGAAAGAATTCATCTTCAGACGTTCAATTGCAATTAACAAGCCACGATACAATTGATCCTTACTCCAATGCAGACCCAGAAAGGGGCAGAACCTACTTGGGGGTACCCCTCTTCTATTACAAGGAGCTTGAGAAAGCAACCAATAACTTCGATCATTCAAGAGAATTGGGAAATGGAGGCTTTGGGTCTGTTTACTACGGAAAACTCCAAGATGGACGTGAAGTTGCGGTTAAGCGCCTATATGACCACAACTACCGGAGAGTAGAACAGTTCATGAATGAAATTGAGACACTAACTCGGTTGCGCCATCAAAACCTTGTGTCTCTTTATGGTTGCACATCATGTCATAGCCGTGAACTCCTCCTCGTGTATGAATACATTCCAAACAAGACAGTTTCTTGTCATCTCCATGGTGAATTAGCTAATTTTGGTTTACTACCATGGCCTGTAAGAATCAAAATTGCCTTAGAAACTGCAACCGCATTGGCTTTCCTCCATGCTTCCGATACCATTCACCGGGATGTCAAAACCAACAACATCCTTCTTGACAACAATTTCTCAGTTAAGGTTGCAGATTTTGGGCTTTCAAGGTTGTTTCCTGATGATGTTACTCATGTTTCCACTGCCCCACAAGGGACACCAGGTTATGTGGACCCGGACTATCACCAATGCTACCAGCTTACAAGCAAAAGTGATGTGTATAGTTTTGGGGTTGTGCTTATCGAGTTGATATCATCTATGCCAGCAGTTGATATGAGCAGGCCTAGAGATGAGATAAATCTAGCAAATCTAGCTATAAATAAGATTCAGAAAAGTGCATTTGGTGAGTTGGTGGATCCTTCTCTTGGTTTCAAGTCAGACAAACAAGTGAGGAGGATGATAGTTTCAGTGGCAGAGTTGGCTTTTCAGTGTTTACAGAGGGACAAGGAATTGAGACCTTCCATGGATGAGGTTTTGGAGATTCTAAAGAGAATTGAGAGTGGGAATGAGGAGTTTGATCATCTTGAAGAAGTGGATAGTCATCGCGCTGTTGGTATATTACACAGCGGTCCTATTCGTCCATCACCACCACCTTCGCCGGACTGTGTCGAGACTGGATTGCTGAAAAGTTCGAAGTCACTGTCTTCACCTAAAGCTGTTACTGATAAATGGCATAGTGAGTCAACTACAACTCATGGGAGTGTCTAA 1740 0.4236 MITVFDQDLHKRLQSNGSCDAFNNNIPILASSPLISFDIKYNITLFKCGHKLNVSTPTGFIKHTCGNFYIYHYSRLLDLQPDQKSHFSACSTLVLPKKDLPDSTDLQAFLSAQMTLDVRLSDTCVKCHNSGGQCQLDRNKNFCYIEAARDRSKIWKLAVGLGLGSFIGLLGILITWWLLGRYYKRKNSSSDVQLQLTSHDTIDPYSNADPERGRTYLGVPLFYYKELEKATNNFDHSRELGNGGFGSVYYGKLQDGREVAVKRLYDHNYRRVEQFMNEIETLTRLRHQNLVSLYGCTSCHSRELLLVYEYIPNKTVSCHLHGELANFGLLPWPVRIKIALETATALAFLHASDTIHRDVKTNNILLDNNFSVKVADFGLSRLFPDDVTHVSTAPQGTPGYVDPDYHQCYQLTSKSDVYSFGVVLIELISSMPAVDMSRPRDEINLANLAINKIQKSAFGELVDPSLGFKSDKQVRRMIVSVAELAFQCLQRDKELRPSMDEVLEILKRIESGNEEFDHLEEVDSHRAVGILHSGPIRPSPPPSPDCVETGLLKSSKSLSSPKAVTDKWHSESTTTHGSV 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0384 579 SMART serkin_6 234 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0384 579 MobiDBLite consensus disorder prediction 531 579 - -
Alju09g0384 579 Gene3D Phosphorylase Kinase; domain 1 207 310 - -
Alju09g0384 579 ProSiteProfiles Protein kinase domain profile. 234 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0384 579 ProSitePatterns Protein kinases ATP-binding region signature. 240 262 IPR017441 GO:0005524
Alju09g0384 579 Pfam Protein kinase domain 236 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0384 579 SUPERFAMILY Protein kinase-like (PK-like) 217 509 IPR011009 -
Alju09g0384 579 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 6 572 IPR044652 GO:0004672
Alju09g0384 579 FunFam receptor-like protein kinase FERONIA 205 310 - -
Alju09g0384 579 FunFam Wall-associated receptor kinase-like 20 311 518 - -
Alju09g0384 579 Gene3D Transferase(Phosphotransferase) domain 1 311 522 - -
Alju09g0384 579 MobiDBLite consensus disorder prediction 550 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0384 Alju-ChrAlju09 5565515 5568561 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0384 2 579 Receptor kinase-like Gene Family AT1G25390 49.402 6.07e-175 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Alju09g0384 Pkinase 2.7e-44 CL0016