Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0376 ATGGTTTGTCAACAAGAAGGAAGGTTCAAACTTGTGATGGCTAAAGCCAACATGCCTGACATGAGCACCATTTCTTTTCTCAATACACTTCTTCTCAAGCATATCACTGTCATCTTTATATGCTCTGGAGAAAATGATGGTGGAGCAAAGGAAGCTTTTGATAGAGGATGTTGTTATCTCCTACAGGAACCAATCCAATCACAGGACCTCATATCTTTGTGGCTTCAAGTCTATAACTCAAATACTAGCAACTTGGCACAAGAGATTCACATTGCAAAATCGAAACAAAAGGTGCATGAATCAAGTGAAGAACAAGACAATACTTATAATGACGTGAGAGTCAAGAAAAAAGGGAAAAGAGCACATAACTCAAACCAGGTGAAATTAGACAACAATAACAATCATCATGCTGCAGAAATGGAGGGAGAGGAAACAAGAGAGCATAACGACAATAAACGGTTCCCTCAGAAAAAGCCGCGTATTTCTTGGACTTCGGATCTGCATCATAAGTTTGTACAGGCCATAAGTGTTCTGGGGGAGAACAATATTCGTCCAAAATTGATACAAGAGATCATGAATGTTCCTTACCTGACATGTCGCCATATTGCTAGCCATCTCCAGAAATTCAAATCTGAAGTAAGGCGTCTTCAGGATAAGTGTAAATCATCAAACTCCAGGGATGGAGCCAAGTCATCCTCATCAATACAGAGCCAGTGTCAGCCAGGTTACCCCACATCAGCTGCTTTCCAAAACCATTTTGCAGTGAGCTTTTGTGGAACCGAAGATCTAGAAGCTGTAGTGAGAGGAGCTGTGCCAGATGCTTTAATGAATCAAAGCCAAACCCTAACTGAAGATAAAAACATATTAAGAATTCATGGAGGAGACAGTGAAGGCTATGACTGTTTTAGAAGGGGTCCAGGTCATATAACCCAAAATTCTGAGATACAAAGTAGTTGTATCCATGGGTACAATACCTTAGATAGTTGCAATCCTAGATCTGCATTGGTGGGAGGACATGAATTAACTGATCAAAATAATACCCTGACACAATATGACAGTGTCTTGAGATTTGTTGGAGAAGGAGATGATTGTTTTGGTAAGGAACCATGTTCACAAAACTCTGAGATGCTAAGAAATTCAGTCCTTGGTTACAACTTTGGTCAAAAGAAGTCTGATAACTACAAACCTAGTTGTGATAGCCTTTTGAAGTCCAAGATTGATGCTTTGAAGAATCAGAATCAGACTTCAACAGAATATAATAATAACTCCAGATTTCTTGAAGAGGACTGTGATAATAACTCTAGTTCGCCGCAGTCTGATGCATATAGCTGTTTTGGAAATGCACCCAGTTCAGATGATATTGTGATGCTCAATAAGTCTCTGACAGGAGCTTCATGTCAGAACTGTACTTGGATGGATTCTGGAGTTTATGGTGACCTTTGA 1443 0.3978 MVCQQEGRFKLVMAKANMPDMSTISFLNTLLLKHITVIFICSGENDGGAKEAFDRGCCYLLQEPIQSQDLISLWLQVYNSNTSNLAQEIHIAKSKQKVHESSEEQDNTYNDVRVKKKGKRAHNSNQVKLDNNNNHHAAEMEGEETREHNDNKRFPQKKPRISWTSDLHHKFVQAISVLGENNIRPKLIQEIMNVPYLTCRHIASHLQKFKSEVRRLQDKCKSSNSRDGAKSSSSIQSQCQPGYPTSAAFQNHFAVSFCGTEDLEAVVRGAVPDALMNQSQTLTEDKNILRIHGGDSEGYDCFRRGPGHITQNSEIQSSCIHGYNTLDSCNPRSALVGGHELTDQNNTLTQYDSVLRFVGEGDDCFGKEPCSQNSEMLRNSVLGYNFGQKKSDNYKPSCDSLLKSKIDALKNQNQTSTEYNNNSRFLEEDCDNNSSSPQSDAYSCFGNAPSSDDIVMLNKSLTGASCQNCTWMDSGVYGDL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0376 480 Gene3D - 2 118 - -
Alju09g0376 480 MobiDBLite consensus disorder prediction 94 160 - -
Alju09g0376 480 SUPERFAMILY CheY-like 5 79 IPR011006 -
Alju09g0376 480 MobiDBLite consensus disorder prediction 134 160 - -
Alju09g0376 480 Coils Coil 206 226 - -
Alju09g0376 480 Gene3D - 155 217 - -
Alju09g0376 480 SUPERFAMILY Homeodomain-like 156 214 IPR009057 -
Alju09g0376 480 MobiDBLite consensus disorder prediction 226 241 - -
Alju09g0376 480 NCBIfam myb-like DNA-binding domain, SHAQKYF class 158 211 IPR006447 GO:0003677
Alju09g0376 480 MobiDBLite consensus disorder prediction 220 241 - -
Alju09g0376 480 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 68 413 IPR044841 GO:0003700|GO:0006355
Alju09g0376 480 Coils Coil 409 429 - -
Alju09g0376 480 FunFam Two-component response regulator 155 217 - -
Alju09g0376 480 MobiDBLite consensus disorder prediction 94 114 - -
Alju09g0376 480 ProSiteProfiles Response regulatory domain profile. 1 78 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0376 Alju-ChrAlju09 5471096 5473932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0376 1 231 Response Regulator Gene Family AT1G68210 29.317 3.27e-24 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju09g0376 None None None