Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0365 ATGGGATTGCAGAACCAGCTAAACGACGTCGCTTCAGATTCGATTCCTCTACTTTTCTTGGCTCTCGTCGCCGATTGCCTCAACCAGCTCCGCTCCTTCCTTATCACTCTCCTCCACTCGCTCGGGCTCTCCAGATTCGACCCGAACCCGGTCGTTGTTGACGATGGACTTTTCACCGCCGTCGGATCGGGCCTTGCCAGCTTAATCGTCCTCTCCGAGCAGCTCAATCTGAATCGCCGCGTCTCCTACAGATACTCCGTCGTAGGTGGTGGCGATGATGGTCCCGCTGGTGTGATTGGATCTCCCAAGTGTGTGGTGTGCCAGAGCACGTTTGAAGACGGCGACCAAGTTCGACGGCTTCCGTGCCGCCATGTTTTTCACCGGTGCTGCTTCGACGGCTGGCTGGACCATCTTAATTTCAACTGCCCTCTCTGTCGAACACCGCTGGTGTCCGACGAGCGCGTGGCGCTTGCGGAGCGGCGCGTCGGCCCGGAGCTTGTTTCCTGGTTCTCTTTGCGGTGA 522 0.5824 MGLQNQLNDVASDSIPLLFLALVADCLNQLRSFLITLLHSLGLSRFDPNPVVVDDGLFTAVGSGLASLIVLSEQLNLNRRVSYRYSVVGGGDDGPAGVIGSPKCVVCQSTFEDGDQVRRLPCRHVFHRCCFDGWLDHLNFNCPLCRTPLVSDERVALAERRVGPELVSWFSLR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0365 173 PANTHER RING ZINC FINGER PROTEIN-RELATED 76 156 - -
Alju09g0365 173 SMART ring_2 104 145 IPR001841 -
Alju09g0365 173 SUPERFAMILY RING/U-box 103 152 - -
Alju09g0365 173 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 96 155 IPR013083 -
Alju09g0365 173 Pfam Ring finger domain 103 146 IPR001841 -
Alju09g0365 173 CDD RING-H2_RHA2B 104 148 - -
Alju09g0365 173 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0365 Alju-ChrAlju09 5326684 5327205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0365 1 173 C3H Transcription Factor Family AT1G15100 49.711 2.07e-47 150