Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0307 ATGTTGAAAAGAAGTAAGAAATCTTCTTCAAGTTCACCAACAATTGACATGATTTCTAGAGTATCATATCAAAGCTTGCACAATGCCACAGATGGATTCTCAATCAATAAGTTGATCGGATCAGGGAGTTTTGGCTCTGTTTATAAGGGAAATTTTGAGTCTCAGGAAGTTGTTGCGATAAAGGTCATCAACCTTCAAACAAGGGGAGCTCACAAGAGTTTTGTTGCTGAATGTAATGCACTTAGAAATGCAAAGCATCGGAATCTGGTAAAAATTATAACATGTTGCTCTAGCATAGATTACCAAGGCAATGAGTTTAAGGCTTTAGTTTATGAGTATATGGTGAATGGAAACCTGGAAAATTGGTTGCATCCTACAACAGAAAATGCAGATCATCCAAGAATTTTGCTCCTTGATCAAATAATAAATATTCTTATAGATATTGTGTCTGCATTAAACTATCTTCACTATGAATATGGGCAGCCTATAATTCATTGTGATTTGAAGCCAAGCAATGTCCTTCTTGATGACAACATGGTTGCCCATTTGAGTGATTTTGGATTGGCAAGACTACTCTCAACCGTTGAAGTCATCTCTAATGAACGAAGTAGCACAATTGGTATAAAGGGTACTGTTGGTTATGTTCCCCCAGGTAAGGAAACCATGTCTGATCATTTCCCTTGA 684 0.3699 MLKRSKKSSSSSPTIDMISRVSYQSLHNATDGFSINKLIGSGSFGSVYKGNFESQEVVAIKVINLQTRGAHKSFVAECNALRNAKHRNLVKIITCCSSIDYQGNEFKALVYEYMVNGNLENWLHPTTENADHPRILLLDQIINILIDIVSALNYLHYEYGQPIIHCDLKPSNVLLDDNMVAHLSDFGLARLLSTVEVISNERSSTIGIKGTVGYVPPGKETMSDHFP 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0307 227 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Alju09g0307 227 Gene3D Transferase(Phosphotransferase) domain 1 114 222 - -
Alju09g0307 227 FunFam LRR receptor-like serine/threonine-protein kinase EFR 4 113 - -
Alju09g0307 227 SMART serkin_6 33 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0307 227 Gene3D Phosphorylase Kinase; domain 1 15 113 - -
Alju09g0307 227 SUPERFAMILY Protein kinase-like (PK-like) 5 217 IPR011009 -
Alju09g0307 227 Pfam Protein kinase domain 34 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0307 227 PANTHER OS04G0122200 PROTEIN 6 217 - -
Alju09g0307 227 ProSitePatterns Protein kinases ATP-binding region signature. 39 61 IPR017441 GO:0005524
Alju09g0307 227 ProSiteProfiles Protein kinase domain profile. 33 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0307 Alju-ChrAlju09 4660930 4662742 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0307 3 217 Receptor kinase-like Gene Family AT3G47570 53.125 3.42e-72 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju09g0307 Pkinase 1e-32 CL0016