Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0306 ATGGTGAATGGAAACCTGGAAAATTGGTTGCATCCTACAACAGAAAATCCAGATCATCCAAGAATTTTGCTTCTTGATCAAATAATAAATATTCTTATAGATATTGTGTCTGCATTAAACTATCTTCACTATGAATATGGGCAGCCTATAATTCATTGTGATTTGAAGCCAAGCAATGTCCTTCTTGATGACAACATGGTTGCTCATTTGAGTAATTTTGGATTGGCAAGACTACTCTCAACCGTTGAAGTCATCTCCAATGAACAAAGCAGCACAACTGGTATAAAGGGTACTGTTGGCTATGTTCCCCCAGCCTCTGTCACGGTGTTCCTGGCTTCTGTCTCGCGTCTCTGTTTCTATGGTGGTGCAGCGGTGGTGGATGATAATGATGATAGTGAGATGACGGTGGAGGAGGAGTGGCGATGA 426 0.4178 MVNGNLENWLHPTTENPDHPRILLLDQIINILIDIVSALNYLHYEYGQPIIHCDLKPSNVLLDDNMVAHLSNFGLARLLSTVEVISNEQSSTTGIKGTVGYVPPASVTVFLASVSRLCFYGGAAVVDDNDDSEMTVEEEWR 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0306 141 Gene3D Transferase(Phosphotransferase) domain 1 1 118 - -
Alju09g0306 141 Pfam Protein kinase domain 23 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0306 141 ProSitePatterns Serine/Threonine protein kinases active-site signature. 50 62 IPR008271 GO:0004672|GO:0006468
Alju09g0306 141 SUPERFAMILY Protein kinase-like (PK-like) 2 107 IPR011009 -
Alju09g0306 141 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 104 - -
Alju09g0306 141 ProSiteProfiles Protein kinase domain profile. 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0306 Alju-ChrAlju09 4643415 4647594 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0306 1 104 Receptor kinase-like Gene Family AT3G47090 50.467 2.29e-27 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju09g0306 Pkinase 5.2e-14 CL0016