Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0302 ATGCTAGATAGTTTGCATAATGCCACAGATGGATTCTCAATCAATAAGTTGATCGGATCAGGGAGCTTTGGCTCTGTTTATAAAGGAAGTTTTGAGTCTCAAGAAGTTGTCGCGATAAAGGTAATCAACCTTCAAATAAGGGGAGCTCACAAGAGTTTTGTTGCTGAATGTAATGCACTTAAAAATGCAAAGCATCAGAATCTGGTAAAAATTATAACATGCTGCTCTAGCATAGATTACCAAGGCAATGAGTTTAAGGCTCTAGTTTATGAGTATATGGTGAATGGAAACCTGGAAAATTGGTTGCATCCTACAACAGAAAATCCAGATCATCCAAGAAGTTTGCTTCTTGATCAAATAATAAATATTCTTATGGATATTGCATTTGCATTAAACTATCTTCACTATGAGTATGGGCAACCCCTAGTTCATTGTGATATGAAGCCAAGCAATGTCCTTCTTGATGACAACATGGTTGCTCATTTGAGTGATTTTGGATTGGCAAGACTACTCTCAACCGTTGAAGCCATCTCTAATGAACAAAGCAGCACAATTGGTATAAAGGGCACTATTGGCTATGTTCCCCCAGGTAAGGAAATCGTGTCTGATCATTTCCCTTGA 621 0.38 MLDSLHNATDGFSINKLIGSGSFGSVYKGSFESQEVVAIKVINLQIRGAHKSFVAECNALKNAKHQNLVKIITCCSSIDYQGNEFKALVYEYMVNGNLENWLHPTTENPDHPRSLLLDQIINILMDIAFALNYLHYEYGQPLVHCDMKPSNVLLDDNMVAHLSDFGLARLLSTVEAISNEQSSTIGIKGTIGYVPPGKEIVSDHFP 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0302 206 ProSitePatterns Protein kinases ATP-binding region signature. 18 40 IPR017441 GO:0005524
Alju09g0302 206 FunFam LRR receptor-like serine/threonine-protein kinase EFR 2 92 - -
Alju09g0302 206 Pfam Protein kinase domain 13 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0302 206 PANTHER OS04G0122200 PROTEIN 3 196 - -
Alju09g0302 206 SMART serkin_6 12 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0302 206 SUPERFAMILY Protein kinase-like (PK-like) 4 196 IPR011009 -
Alju09g0302 206 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Alju09g0302 206 ProSiteProfiles Protein kinase domain profile. 12 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0302 206 Gene3D Transferase(Phosphotransferase) domain 1 4 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0302 Alju-ChrAlju09 4574163 4578090 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0302 5 196 Receptor kinase-like Gene Family AT3G47090 53.571 5.83e-68 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju09g0302 Pkinase 3.6e-31 CL0016