Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0295 ATGATTTCTAGAGTATCATATCAAAGCTTGCACGATGCCACCGATGGATTCTCAATCAATAAGCTGATTGGATCAGGGAGTTTTGGCTGTGTTTATAAGGGAAGTTTAGAATCTCAAGAAGTTGTCGCGATAAAGGTCATCAACCTTCAAATCAAGGGAGCTCACAAGAGTTTTGTTGCTGAATGTAATGCACTTAGAAATGCAAAGCATCGAAATTTGGTAAAAATTATAACATGCTGCTCTAGCATAGATTACCAAGGCAATGAGTTTAAGGCTCTAGTTTATGAGTATATGGTGAATGGAAACCTAGAAAATTGGTTGCATCCTACAACAGAAAATCCAAATCATCTAAGAATTTTGTTCCTCGATCAAATAATAAATATTCTTATAGATATTGTGTCTGCATTAAACTATCTTCACAATGAATATGGGCAACCTATAATTCATTGTGATTTAAAGCCAAGCAATGTCCTTCTTGATGACAACATGGTAGCTCATTTGAGTGATTTTGGATTGGCAAGACTACTCTCAACCGTTGGAGTCATCTCTAATGAACAAAGTAGCATAATTGGTATAAAGGGTACTATTGGCTATGTTCCCCCAGAATATGGAATGGGTTCTCCAACATCAATACAAGGTGACATGTATAGCTTTGGCATTCTTGTCTTAGAGATGTTAACTAAAAGAAGACCCACGGATGATATGTTTAAAGATGGTCACAATCTTCAAACATATGTGAAAGTTGCATTTCCAAGCAAGCTTTTGGAAGTTGTGAGCCCAACCATTCTTCCACGAGAATTAGAGCATAGAGTGGGAGCATCAAGAGACTTATCGATCCATCCAAATGTTGAGAAATGCATATGTTCTTTATTTGAGATTGGACTTACATGTTCAATGGAATCACCTCATGAAAGAATGATTGCAATTGATGTCCTCAGGGAGCTAAATTCTATCAAAAGTTTTTCCCTTTATGGTAAGGAAATCGTGTCTGATCATTTCCCTTGA 1005 0.3672 MISRVSYQSLHDATDGFSINKLIGSGSFGCVYKGSLESQEVVAIKVINLQIKGAHKSFVAECNALRNAKHRNLVKIITCCSSIDYQGNEFKALVYEYMVNGNLENWLHPTTENPNHLRILFLDQIINILIDIVSALNYLHNEYGQPIIHCDLKPSNVLLDDNMVAHLSDFGLARLLSTVGVISNEQSSIIGIKGTIGYVPPEYGMGSPTSIQGDMYSFGILVLEMLTKRRPTDDMFKDGHNLQTYVKVAFPSKLLEVVSPTILPRELEHRVGASRDLSIHPNVEKCICSLFEIGLTCSMESPHERMIAIDVLRELNSIKSFSLYGKEIVSDHFP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0295 334 Pfam Protein kinase domain 18 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0295 334 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 98 326 - -
Alju09g0295 334 SUPERFAMILY Protein kinase-like (PK-like) 3 315 IPR011009 -
Alju09g0295 334 Gene3D Transferase(Phosphotransferase) domain 1 98 327 - -
Alju09g0295 334 ProSitePatterns Protein kinases ATP-binding region signature. 23 45 IPR017441 GO:0005524
Alju09g0295 334 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 321 - -
Alju09g0295 334 ProSiteProfiles Protein kinase domain profile. 17 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0295 334 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Alju09g0295 334 SMART serkin_6 17 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0295 334 Gene3D Phosphorylase Kinase; domain 1 1 97 - -
Alju09g0295 334 FunFam LRR receptor-like serine/threonine-protein kinase EFR 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0295 Alju-ChrAlju09 4263515 4265020 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0295 4 319 Receptor kinase-like Gene Family AT3G47570 51.250 1.97e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju09g0295 Pkinase 1.9e-41 CL0016