Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0292 ATGATTTTTAGAGTATCATATCAAAGCTTGCACAATGCCACAGATGGATTCTCAATCAATAAATTGATCGGATCAGGGAGTTTTGGCTCTGTTTATAAGGGAAGTTTTGAGTCTCAAGAAGTTGTCGCGATAAAGGTCATCAACCTTCAAATAAGGGGAGCTCACAAGAGTTTTGTTGCTGAATGTAATGCACTTAGAAATGCAAAGCATCGGAATCTGGTAAAAATTATAACATACTGCTCTAGCATAGATTACCAAGGCAATGAGTTTAAGGCTCTAGTTTATGAGTATATGGTGAATGGAAACCTCGAAAATTGGTTGCATCCTATAATAGAACATTCAGATCATCCAAGAATTTTGCTCCTAGACCAAATAATAAATATTCTTATAGATATTGTGTCTGCCTTAAACTATCTTCACTATGAATATGGGCAACCTATAATTCATTGTGATTTGAAGCCAAGCAATGTCCTTCTTGATGACAACATGGTTGCTCATTTGAGTGATTTTGGATTGGCAAGATTACTCTCAACCGTTGAAGTCATGTCTAATGAACGAAGCAGTACAATTGGTATAAAGGGTACTGTTGGCTATGTTCCCCCAGAATATGGAATGGGTTCTCCAACATCAATACAAGGTGACATGTATAGCTTTGGCATTCTCGTTTCCGTTTATGGCAAGCATGGATACCCTATCACGGTGGCTCGGTACTCTCCCAATGGTGAATGGATTGCTTTAGCAGATGTTTCCAGTTCCAGGGACAAACTTGGCGAGTTGTCTGCAGAGGGTGGCCACAAGGGCAGCATATATGCTGTAAGTTGGGGTCTTGACAGTAAACAGGTAATAGCCTGCATGTATCATCAGCTCATTGTTGAAGCATCCCTTGTTGAGGAGCTCGTTCTTGTTGTTTTTGTTTTTGTTTTGTTTTGTTTTTTTTTTTGGGAATCTTTGGATTGCCCTACCATGAGCTGA 972 0.394 MIFRVSYQSLHNATDGFSINKLIGSGSFGSVYKGSFESQEVVAIKVINLQIRGAHKSFVAECNALRNAKHRNLVKIITYCSSIDYQGNEFKALVYEYMVNGNLENWLHPIIEHSDHPRILLLDQIINILIDIVSALNYLHYEYGQPIIHCDLKPSNVLLDDNMVAHLSDFGLARLLSTVEVMSNERSSTIGIKGTVGYVPPEYGMGSPTSIQGDMYSFGILVSVYGKHGYPITVARYSPNGEWIALADVSSSRDKLGELSAEGGHKGSIYAVSWGLDSKQVIACMYHQLIVEASLVEELVLVVFVFVLFCFFFWESLDCPTMS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0292 323 Pfam Protein kinase domain 18 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0292 323 PANTHER OS04G0122200 PROTEIN 4 222 - -
Alju09g0292 323 Gene3D Phosphorylase Kinase; domain 1 1 97 - -
Alju09g0292 323 SUPERFAMILY Protein kinase-like (PK-like) 4 222 IPR011009 -
Alju09g0292 323 ProSitePatterns Protein kinases ATP-binding region signature. 23 45 IPR017441 GO:0005524
Alju09g0292 323 FunFam LRR receptor-like serine/threonine-protein kinase EFR 1 97 - -
Alju09g0292 323 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Alju09g0292 323 Gene3D Transferase(Phosphotransferase) domain 1 98 253 - -
Alju09g0292 323 SMART serkin_6 17 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0292 323 ProSiteProfiles Protein kinase domain profile. 17 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0292 323 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 214 287 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0292 Alju-ChrAlju09 4172245 4178441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0292 4 222 Receptor kinase-like Gene Family AT3G47090 56.250 1.09e-79 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju09g0292 Pkinase 5e-37 CL0016