Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0238 ATGGATGACCAAGTTGTTCAGCGCGTCTTCCATGAAGGAGGTCGCGATTATTATCAACAACAGCCTTCTACGTCATCGTCTTCCTCCTCCATCCTTCAATCTCTTCCTCTCCATGTGTCTTTTGATCATGGCTATTATTTGTTAGTAAAATCTATCCAAGAACTTCGAGAGAGAAAAGAGGGTCTTGTTACAGTTGGCATTGGTGGTCCTAGTGGTTCTGGTAAAACAAGCTTAGCAGAGAAGGTGGGATCTGTTATTGGTTGTACTGTTATATCAATGGAGAATTATCGCAATGGAGTTGATGAAGGGAATGATTTGGATTCTATAGACTTTGATGCCTTGGTCAAGAATCTTGAGGATTTGACCCAAGGCAATGATACAGTGATTCCTGTGTTTGACTATCAACAAAAGAGGCGTGTTGGATATAAAGCCATAAAGAGTGCTTCATCAGGGGTGGTAGTAGTTGACGGGACATATGCTCTACATGCGAAACTGCGGTCTTTGCTAGATATTCGAGTTGCTGTGGTTGGCGGTGTTCATTTTAGCTTGCTTTCTAAAGTTCGCTATGATATTGGAGATTCTTGTTCGCTGGATTACCTTATTGACAGTATTTTCCCATTGTTTCGGAAGCACATTGAGCCAGATCTTCATCATGCGCAGATCAGAATTAATAACAGCTTTGTTTCATCATTTAGAGAAGCTATCTACAAGGTGAAATGCAGAAGTGAGTCCCCTGATGGACATTTGGGTTCTGCCTTTCAACAAGATGAGGCCCAAACAGACAATTTTATAGAGATGTATCTTAGACCTCCTTCAGCTAGTGAAGAAGCAACAATTAATGATTGGATCAAGGTGCGACAATGTGGAATTAGATATTATCTTTCCCTTGGTGACCAGAGGATTGTTGACAAAAATTTCATTATCAGACCAAAGGCTGAGTTTGAGGTTGGGCGAATGACACTAGGGGGGTTGCTTGCTCTGGGTTACTCTGTTGTCGTTAGCTATAAACGTGCATCTACAACAGTCAGTAATGGCAATGTTTCTGTGTCTTTTGAAACCATTGATGCTCTGGGTGAGACATACATGGTGATGAGGGGAACAAACAGGAAAACAGTTGGAACAGAAGCATTAAAGATGGGTGTAAGTGGCCCTTGGATCACTAAATCATATCTGGAAATGATTCTTGAGAGAAAAGGTGTACCTCGTCTAAGTACACCACCACTTGTGTCTAATAAACCTTTGTCTGGCAATCAAGAAGGAGCAATTGTTGCACCAAAGCCAATCCGAGTTACCCCTAACATTGTAACTGGAATCGAGGATTTATCTCAGCCATGGACTCGATCCCCAAGAAAGTCCAAAATGGAACCTGTCATAGCAACTTGGCGTTTTATATCTTCAGATTCATCTCAGACTGACAACACTGTACTAGATCCTTCATCTTTCAGGGATACTATGAGGCTTGCTCCAATGCCTGATTCCTATGACCTGGATAGGGGATTGCTTTTGGCCGTTCAAGCAATACAGGCTTTGTTGGAGAAGAAAGGAGTTCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGGTCTGGAAAGACTAGTTTGGCCCATAAAATGGCAAATATCATTGGCTGTGAGGTAGTTTCTCTGGAAAGCTATTATAAACGAGTAAAGGATTTTAAATATGATAACTTCAGCTCGCTTGATCTAGCTTTGCTATCAAAGAATATTGATGACATACGGAATGTTCGGAGAACAAAAGTTCCTCTCTTTGACTTGGAAAGTGGTGCCCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGGGTTTATGCGTTGCATCCTGATATCCGAAAATCTCTTGACTTGTGGATTGCTGTTGTAGGAGGTGTTCATTCACATTTGATATCTCGAGTTCAAAGGGACAAGAGTAGAGTGGGATGTTTTATGTCCCAAAATGAGATTATGATGACAGTATTTCCTATGTTCCAGCTGCACATTGAACCACATCTTGTCCATGCTCATCTTAAGATAAGAAATGACTTTGACCCTGTTCTGTCCCCTGAGAGTTCATTGTTTGTATTGAAGAGTAACAAAAAAGTAGCTTATCAAGATATTCTTACGATTCTTGATCCAGCAAAATTTTGCAGTTCTGTTCAGAAGTTCATTGATTTATATTTAAAGCTTCCTGGGATCCCCTCGAACGGACAGTTGACAGAGGGCGATTGTATTAGAGTCAGAATATGCGAAGGAAAATTTGCTTTGTTGATACGTGAGCCTATTAGAGAAGGAAACTTCATCATTCAACCGAAAGTGGATTTTGATATTGGCATTAGTACGGTTACAGGTCTTCTCAATCTTGGGTATCAGGCAGTAGCTTATATTGAAGCATCTGCGTTCATTTACCAAGATGGAAAGATTCTGATTGAGGTTGACCATCTACAAGATGTCTCTGGTCCATACATTCAGATTAAGGGTGTTGATAAGGATGCTGTAGCAGCAGCTGGTTCAATGCTTAAATTGGATGACACATATACTACTAAGAGTTATCTTCAAATAATTTTGGAAAACCTACCTGCACTGGAAAGAACTTTTGGCGGCATCTACTCTCAGCAGTCTGCGAGGATGCAAGAAATTGTTGAGTTTATTCAATCTCAGGGAAGCAGCTTAGCATCAGAATGCTCACCAAGCAGAGAGGCTTCCCCAATGGAAGGGATTATCGAGGAAATGCAGTTGAGGATTAGAAGGCTAGAACGGTGGCTTACTGTAAATACGGTTTTATGGACATTTCTGATGTCTGCTCTTGTGGGTTATTCACTATACCAAAGGAAGCGTCAATGA 2859 0.411 MDDQVVQRVFHEGGRDYYQQQPSTSSSSSSILQSLPLHVSFDHGYYLLVKSIQELRERKEGLVTVGIGGPSGSGKTSLAEKVGSVIGCTVISMENYRNGVDEGNDLDSIDFDALVKNLEDLTQGNDTVIPVFDYQQKRRVGYKAIKSASSGVVVVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESPDGHLGSAFQQDEAQTDNFIEMYLRPPSASEEATINDWIKVRQCGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYSVVVSYKRASTTVSNGNVSVSFETIDALGETYMVMRGTNRKTVGTEALKMGVSGPWITKSYLEMILERKGVPRLSTPPLVSNKPLSGNQEGAIVAPKPIRVTPNIVTGIEDLSQPWTRSPRKSKMEPVIATWRFISSDSSQTDNTVLDPSSFRDTMRLAPMPDSYDLDRGLLLAVQAIQALLEKKGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKRVKDFKYDNFSSLDLALLSKNIDDIRNVRRTKVPLFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRKSLDLWIAVVGGVHSHLISRVQRDKSRVGCFMSQNEIMMTVFPMFQLHIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILTILDPAKFCSSVQKFIDLYLKLPGIPSNGQLTEGDCIRVRICEGKFALLIREPIREGNFIIQPKVDFDIGISTVTGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVSGPYIQIKGVDKDAVAAAGSMLKLDDTYTTKSYLQIILENLPALERTFGGIYSQQSARMQEIVEFIQSQGSSLASECSPSREASPMEGIIEEMQLRIRRLERWLTVNTVLWTFLMSALVGYSLYQRKRQ 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0238 952 Gene3D - 704 864 - -
Alju09g0238 952 SMART AAA_5 61 211 IPR003593 GO:0016887
Alju09g0238 952 SMART AAA_5 516 660 IPR003593 GO:0016887
Alju09g0238 952 Gene3D - 63 242 IPR027417 -
Alju09g0238 952 CDD UMPK_like 64 226 - -
Alju09g0238 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 505 687 IPR027417 -
Alju09g0238 952 PANTHER URIDINE KINASE 496 682 - -
Alju09g0238 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 176 IPR027417 -
Alju09g0238 952 CDD UMPK_like 519 687 - -
Alju09g0238 952 Pfam Phosphoribulokinase / Uridine kinase family 519 684 IPR006083 GO:0005524|GO:0016301
Alju09g0238 952 Pfam Phosphoribulokinase / Uridine kinase family 107 223 IPR006083 GO:0005524|GO:0016301
Alju09g0238 952 PRINTS Uridine kinase signature 517 534 - -
Alju09g0238 952 PRINTS Uridine kinase signature 544 555 - -
Alju09g0238 952 PRINTS Uridine kinase signature 638 648 - -
Alju09g0238 952 Gene3D - 516 693 IPR027417 -
Alju09g0238 952 SUPERFAMILY CYTH-like phosphatases 725 859 IPR033469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0238 Alju-ChrAlju09 3205641 3217965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0238 512 653 PRT Gene Family AT1G55810 25.974 9.70e-09 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g0238 09 3205641 3217965 Alju09g0238 09 3205641 3217965 ECH