Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0233 ATGTCTGATTCATTCAGAGCTTTCAAGCTTTGCTCTTACACCCCAAATGCCAACACTATTTCTGCATCATCAGCTCCACATATCACTTCAAACCCTTATTATTGTCTTTGTGCCCACTGTAACAATCTTCTCTCCTTCAATATTCATCATCAGGGAGAGGAAGAAGGAGGTTTTATTACAAGCAGCTCAAGGTGGACCCCAACACCAGCACAGTTGCTATACCTTGAGCAACTCTACACACAAGGAACTAAGACTCCTACGGCTCAACAAATCCAGCTTATAGCTTCGCAACTACGTCGTTTTGGCAACATCCAAGCCAAGAATGTCTTCTACTGGTTCCAGAACCACAAAGCCAGAGATCGCCACTACCACAAACGTCGTCGTTTCGACCTCCAAATCACCTCTCCTCCTCCTCTTCATCAGCAACAACAAAAAGATCAGCTCACTGAAACCCTAATGCTTCAACCACCTCAAGATGCTCTTCAAGGATTGAGAGGGACAGGTTATGAAGTTAAAGAGACAAACAAGTGGGCATCTCCTTCTAACTGCAGTGCACTTGCACAGGTTTCTGATTCACTGAATAGAGCAGGAAGAGGAGATTATAGGAGGACTCAAAGAGAGGAGAGAGAAACACAAATTTTGAGAATGAAGAGAGGGGAAAGCCAAGAAGCTAAGTGCCAAATTAGAGATATGTGTCATTTCCTTTCAAATTCCAAGAATCTCATCAAAAGCATTACCAATACTTCAACTACAACTCATCAGACACAAACATCAAACCCTACAAACTATTATTGTCATGAAGAAGATGAAGAAGTTGCAGATCAGAAAACCCTTAAGCTGTTTCCTCTTGAGAGATCAGATGATGATGATGATGAGGGCACTGAAAGGAGCAAACATAAATTCTGTTCGTTCAATAATATTGCTTCCATGGAATCTGAGGAAATAACTTCCAATCAGTTTTTTGAGTTCCTTCCTTTAAGAAATTGA 987 0.4134 MSDSFRAFKLCSYTPNANTISASSAPHITSNPYYCLCAHCNNLLSFNIHHQGEEEGGFITSSSRWTPTPAQLLYLEQLYTQGTKTPTAQQIQLIASQLRRFGNIQAKNVFYWFQNHKARDRHYHKRRRFDLQITSPPPLHQQQQKDQLTETLMLQPPQDALQGLRGTGYEVKETNKWASPSNCSALAQVSDSLNRAGRGDYRRTQREERETQILRMKRGESQEAKCQIRDMCHFLSNSKNLIKSITNTSTTTHQTQTSNPTNYYCHEEDEEVADQKTLKLFPLERSDDDDDEGTERSKHKFCSFNNIASMESEEITSNQFFEFLPLRN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0233 328 Pfam Homeodomain 62 122 IPR001356 GO:0003677
Alju09g0233 328 Gene3D - 60 122 - -
Alju09g0233 328 CDD homeodomain 64 122 IPR001356 GO:0003677
Alju09g0233 328 SUPERFAMILY Homeodomain-like 63 126 IPR009057 -
Alju09g0233 328 ProSiteProfiles 'Homeobox' domain profile. 64 123 IPR001356 GO:0003677
Alju09g0233 328 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 53 323 IPR044555 GO:0003700|GO:0099402
Alju09g0233 328 SMART HOX_1 60 127 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0233 Alju-ChrAlju09 3167228 3169848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0233 59 128 Wox Gene Family AT3G18010 65.714 1.26e-24 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Alju09g0233 Homeodomain 4.5e-17 CL0123