Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0195 ATGGATGGCGATTTTTTGAGAATGGATGATAATCACATACAATTATCACCTGATAACAGTTTTCTTGATGATCTTCTAAATTATTTCGACGAGTTTACCGATTATGCAGTTGAGTTTGTAACAAACCCTCTCCAAGATTCAACTCAAGATCACTCTGCCTTGCCGGCGAATCCATTTGTCTCATCAAGCCACATCTTTCCACCGCACGCAGTTCAAATGGCTGATCTGTCTCAACAACAGGCTAATCCATTTGCCACATCGAGCAACATCTCTCCGCTGCTGGCCATCATAATGGCCACCTTGGCTCGATCGCAAGCAAATCCCGGCACAACTTATCAACCTCAGCAGCAGCATTTGTTGATGAACCCAGCCAATCCACAACAAATGGGTCATAGGGCTTTTTCTGTGTATTCTGGTTCTATATCATTATTAATGCAAATACCTCCAAGTCTCTCAGATTTCTATGAAGTCTGCAAAGGATTAGAACTTGCCAGAAATTTTCAGTTTCCTGTGTCAATAGAGCCTCCACAATCCTTTCATGCAACCATGGAAGAGTATATTAGGGAGGCACCACGAGTGGTTACAGTTCCAAGTGAACCATTGCTTCAGTTGACATACAGACCAGAAGAAGCTTCAGCTTCAGAAGACAGAGAATTACCTGTTGAAGAACAGGAGCCATCAGTAGGAATGGCATCGACTTTTGTATGCTCAAACAAAAATTTTGATCCAACTGGGTGGGAGCTTTTCCTCGTCACCACTCCAAGTAACAATATTTCTTCAGTCAATGAGAGGCAATTGCAAATTGAATATCTCATGGGAATTGATGATGACCCTCCCCAAAATTCAACTCAATACTCTGCCTTGCTGGCATTTGAAGATTACTTTAGAATGGAGGATGACCCTCCCCAAGATTCAACTCAACATCACTCTGCCGTGCTGGACCCTTTTGAAGATTACTCTGGGGAAGTTCCTACTTCCCAATTTTTGGAAGTTCCTGTTTCTGCTTCTCAAACACTTCAAAATGTTTCAACTCAGCAACATCTTCATGCCCAACAGTATCAACCGAAGCCAACTCCTCTGCAGTCTTTTGGCCATAATAACCAAATCATCCAATTAGCATCTCCCCCAAATAAGAGAAGGCATGATGAATCGCCACGATCACTCACTTCTGATGTTCAACCTCTACAAGATAATCTGAGTGACAGTGTTGAGCCTTCAAAGCCTACACCACATTCAACTCAACAACACCCTCCTCTTACTTCACAGTGTTTGGAAGTTCCTATTTCCACTTCTCAATCACTTCAAAATGTTTCAACTCAGCAACATGTTTATGCCCAGCAGTATCAACCCAAGCCAACTCCTCTGCAGTCTTTTGGCCATAATAACCAAATCATCCAATTACCAACTCCCCCAAATAAGAGGCAGAAGATATCAAGCAGGCGATGCGGATGTAAGGCCAGCAAATGTCAAAAGCGTTACTGTGAATGTTATGCTGCTGGAGAAGTATGTGGCGAAAACTGTAGCTGCGAAGGTTGTTTTAACAAATCGGAATATGAAGCAACAGAGAAAAGGAACAGCAATATGCGTCATAATCCGCAGGCAGTATATGGAGCACCTACCCTGAATTCATTTGCTCCACCGCCAGCAAATTCATTTACCACATCAAGCAACATCTCTCCACCACAGGCAGTCCAAATGGCCACGATGGCTCGACAGCAGGCGAATCCATTTGTCTTATCAAGCCACATCTTTCCACCGCACGCAGTCCCAATGGCTGATCTGTCTCAGCAACAGGCCAATCCATTTGCCACCAGCAACATCTCTCCTCTGCCGGCCGTCCAAATGGCCGTCATGGCTCGACCGCGAGCAAATCCCGGCACAACTTATCAACCACAGCAGCAACATATGTTGATGAACCCAACCAATGCACAACAAATAGGTCATAGGGCGTTTTCTGTGAATTCTGGTTCTAGATCACCATTAATGCAAATACCTCCAAGACTCCGTCAGGAAGCCAACAAGATCAACTTGTATTGGAAGCAGCTGCCAAGAGAATCATCAATATAA 2067 0.4403 MDGDFLRMDDNHIQLSPDNSFLDDLLNYFDEFTDYAVEFVTNPLQDSTQDHSALPANPFVSSSHIFPPHAVQMADLSQQQANPFATSSNISPLLAIIMATLARSQANPGTTYQPQQQHLLMNPANPQQMGHRAFSVYSGSISLLMQIPPSLSDFYEVCKGLELARNFQFPVSIEPPQSFHATMEEYIREAPRVVTVPSEPLLQLTYRPEEASASEDRELPVEEQEPSVGMASTFVCSNKNFDPTGWELFLVTTPSNNISSVNERQLQIEYLMGIDDDPPQNSTQYSALLAFEDYFRMEDDPPQDSTQHHSAVLDPFEDYSGEVPTSQFLEVPVSASQTLQNVSTQQHLHAQQYQPKPTPLQSFGHNNQIIQLASPPNKRRHDESPRSLTSDVQPLQDNLSDSVEPSKPTPHSTQQHPPLTSQCLEVPISTSQSLQNVSTQQHVYAQQYQPKPTPLQSFGHNNQIIQLPTPPNKRQKISSRRCGCKASKCQKRYCECYAAGEVCGENCSCEGCFNKSEYEATEKRNSNMRHNPQAVYGAPTLNSFAPPPANSFTTSSNISPPQAVQMATMARQQANPFVLSSHIFPPHAVPMADLSQQQANPFATSNISPLPAVQMAVMARPRANPGTTYQPQQQHMLMNPTNAQQIGHRAFSVNSGSRSPLMQIPPRLRQEANKINLYWKQLPRESSI 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0195 688 SMART CXC_2 477 518 IPR033467 -
Alju09g0195 688 MobiDBLite consensus disorder prediction 340 374 - -
Alju09g0195 688 ProSiteProfiles CRC domain profile. 478 534 IPR005172 -
Alju09g0195 688 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 480 515 IPR005172 -
Alju09g0195 688 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 331 531 IPR044522 GO:0003700
Alju09g0195 688 MobiDBLite consensus disorder prediction 388 419 - -
Alju09g0195 688 Pfam ANTH domain 150 189 IPR011417 GO:0005543
Alju09g0195 688 MobiDBLite consensus disorder prediction 340 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0195 Alju-ChrAlju09 2432472 2441658 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0195 463 519 CPP Transcription Factor Family AT4G14770 50.794 2.43e-11 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Alju09g0195 ANTH 3e-05 CL0009