Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0185 ATGCCGCTGTTCCACGAGGGTTCTGCTCAAATGAAAAATTGGGATATACCTTGTTTGTTCCTTTTGAGGGTACGTAGGGCATCGAACAATAATAATATGGATCAGGGCTTTCTGGGGATCCTCAAAATTCGTATAAAAAAAGGAATCAACCTGGCTGTACGTGACAGTCGTACAAGTGATCCTTACGTTGTTATCACCATGCACGAACAGAAACTGAGGACTAAAGTTGTTGAAGATGACTGCAATCCTGAGTGGGATGATGAGCTGACATTGTATGTAAAGAGAATCGATGATCCAATCATTCTAAGAGTGTTCGACAAGGACACGTTCACGGAGGACGATCCAATGGGGGAAGCAGAGTTGGACATAAAGCCATTGCTACAGTGTGCGAAGATGAACATGACGATGACAGAAAATCTGGAAGAAGGATGTGTGGTCAATAGAGTTAAGCCCAGCAAGAATAACTGTCTCTCTGAAGAAAGCTTGTGCACCTGGGTTGACGGAAAATTCCGACAAGAAGTGCTTCTCAAATTGAACAAAGTTGAGCGAGGTGAATTACTCGTCCAAGTTGTGTGGAATGATGAAGGTTGTTTGGGATTATCCAACGTTAACTTGTAA 618 0.4288 MPLFHEGSAQMKNWDIPCLFLLRVRRASNNNNMDQGFLGILKIRIKKGINLAVRDSRTSDPYVVITMHEQKLRTKVVEDDCNPEWDDELTLYVKRIDDPIILRVFDKDTFTEDDPMGEAELDIKPLLQCAKMNMTMTENLEEGCVVNRVKPSKNNCLSEESLCTWVDGKFRQEVLLKLNKVERGELLVQVVWNDEGCLGLSNVNL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0185 205 ProSiteProfiles C2 domain profile. 21 136 IPR000008 -
Alju09g0185 205 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 39 179 IPR035892 -
Alju09g0185 205 Pfam C2 domain 39 131 IPR000008 -
Alju09g0185 205 Gene3D C2 domain 38 196 IPR035892 -
Alju09g0185 205 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 37 193 IPR044562 -
Alju09g0185 205 SMART C2_3c 40 135 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0185 Alju-ChrAlju09 2364496 2366759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0185 71 201 C2H2 Transcription Factor Family AT1G70790 46.212 1.55e-39 130
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g0185 09 2364496 2366759 Alju09g0185 09 2364496 2366759 ECH
Alju09g0185 09 2364496 2366759 Alju07g1377 07 39061571 39064105 ECH