Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0164 ATGTGGCGATTTTTTGAGCGTACGATATTTGGAACGGCTACATTTCAACAGCACCACCCACCTGGCACTTTCTCTCCTAGAAGAGAAAACCGATCCTTCTCCTTCTTCACTAGCGGCCCTGAAACCCTAGTCTTCTTGGCGCCGTATCTGCTTCAACAGAGCGTCCACGCGACAAGACTCAGGAAAGATTCTGGTGAACGTAGTTTTCCCCCTGTTTTACTTAGCTTGGATGAGGAAATCTGCGTAGAGAACGCTCGTTTTGATTGTTCTTGTATGGGTGAGGAGGTTAAGGCTATTGTTCCAGAGTCTGTGTTGAAGAAGCAGAAAAGGGAAGAGGAATGGGCATTGGCCAAGAAACAGGAGCTTGAAGCTGCTAAGAAGAAGAGGACAGAGAGCCGTAAGTTGATTTTCAACAGAGCTAAGCTGTACGACAAGGAGTATAAGGAGCAAGAAAGGGAATTGATTAGATTGAAACGTGAGGCAAAGCTGAAAGGTGGATTTTATGTTGACCCAGAAGCTAAACTTTTATTTATTATTCGCATCCGTGGTATTAATGCCATGCATCCAAAGACTAGGAAGATCTTGCAGCTTCTGCGATTGAGACAGATCTTCAACGGTGTGTTTCTTAAAGTTAACAAAGCCACAATGAACATGCTGCACAGAGTTGAACCTTATGTGACTTATGGATACCCAAATCTTAAGAGTGTCAGTGAACTTATTTACAAGAGGGGTTATGGCAAGGTCGACAAGCAGAGAATTGCTTTAACTGACAACTCCGTTGTTGAGCAGGCACTGGGCAAACATGGAATCATCTGCATTGAGGACCTCATCCATGAGATCATAACAGTTGGTCCCCACTTTAAGGAGGCCAACAACTTCCTTTGGCCATTTAAACTCAAGGCTCCTTTGGGTGGACTGAAGAAGAAGAGAAACCATTATGTTGAAGGAGGCGATGCTGGAAACAGAGAGAATTACATTAATGAGCTCATCAGAAGAATGAACTAA 1005 0.4388 MWRFFERTIFGTATFQQHHPPGTFSPRRENRSFSFFTSGPETLVFLAPYLLQQSVHATRLRKDSGERSFPPVLLSLDEEICVENARFDCSCMGEEVKAIVPESVLKKQKREEEWALAKKQELEAAKKKRTESRKLIFNRAKLYDKEYKEQERELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVSELIYKRGYGKVDKQRIALTDNSVVEQALGKHGIICIEDLIHEIITVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0164 334 Coils Coil 105 125 - -
Alju09g0164 334 CDD Ribosomal_L7_archeal_euk 175 334 IPR035808 -
Alju09g0164 334 FunFam 60S ribosomal protein L7 280 334 - -
Alju09g0164 334 ProSitePatterns Ribosomal protein L30 signature. 194 226 IPR018038 -
Alju09g0164 334 Gene3D - 175 278 IPR036919 -
Alju09g0164 334 Gene3D - 279 334 IPR036919 -
Alju09g0164 334 PANTHER 60S RIBOSOMAL PROTEIN L7 98 334 IPR039699 -
Alju09g0164 334 Pfam Ribosomal L30 N-terminal domain 100 171 IPR012988 -
Alju09g0164 334 Coils Coil 140 160 - -
Alju09g0164 334 Pfam Ribosomal protein L30p/L7e 176 226 IPR016082 -
Alju09g0164 334 NCBIfam 60S ribosomal protein uL30 101 334 IPR005998 GO:0000463|GO:0003735|GO:0022625
Alju09g0164 334 SUPERFAMILY Ribosomal protein L30p/L7e 175 334 IPR036919 -
Alju09g0164 334 FunFam 60S ribosomal protein L7 175 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0164 Alju-ChrAlju09 1814535 1816733 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0164 95 334 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 86.250 8.51e-155 432