Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0162 ATGCAGCGATCTGAAGCCCAACCTCGTCTTCCTCCTCCTCAGGGCTTGAATGTTCTCTTAGTCAGCACTGATGATGCCATCCATAGCTGTATTAAGAATCAACTTTCACATCCTCATTATCAAATCGCTATATTTCTCAATTGTAATTCGGCGTTACGATTCTTAAAAAATGATGACGTTGACTTGGTTCTCAGTGATTTCTCTTTGAAAGACATGGATGGCTATGAATTCATCACCCAAGTCCAACACTTGAGAAAAAATATTCCTCACGTTGTAATATTTGAAGCTGAAATATCAGGTCATGAGATCAGCACGGCGTATAAATTGGGTGCATGTTATATTTTGCGGAAGCCAGTGAGTGAGGCGTCTGATGAGATTAGAAATTTATGGCAACATGTTTTTAGGTGGAGGGCTCAGAATGAGGCTTCTTCTTCTCTTGTTTCTTCGCAACAAGAAAGTCTAAAAAGAGGAAATGAGTTTATGAATCATGGCGAAGAACCTTCTTCGAATAAGAGAACACGGTTCGTCTGGACCGAGGAACGCCATGCACGGTTTGTTGAAGTTGTGGAACAACTTGGTAAAGATGCGGTGCCTAAAAATATCCTTCTAGCTATGAATGAGCCAGGAGTATCATCATCTTTGTACCCTGACATGTCGCATCTTCACCTTCTAGAAGCTTCCACGACTAATTCTCCTCCTCCTCCTCGGCCCCAAATGCAACGCCATCGTTATAATGATCAACATCTTGCCTGCGAGCGGCAAATACAATATAAACATCACCACCTCAATTTTGGGGTCACACGTCTTGTGGGGAATGAGGTCAATAACCTGACTTCTTTTATGCAGCAGCCTTCGCTTTCTTCCTATGGAAGAAGAATGCATCAGCCTGCAGATCAAATTTCTAATGATGGAAACCAAGCTCTGGGTACTTCTCAAAATCCATCTTCAGGTTCTGGAATCATAAATAACCATCGAGATTCCTTTGAAAGTAAGGAAATTAATATGCTGCAAAACTCAGGTTTAGGGTCTTCTCCTCATGGTACTACTATTAGAGGTGCTAATCAAAGCCAGAGCAATCAAAACCAAGATTCATGTTTTTCTTCTCATAGTACTAGTAATATGCTGCTGCATCAACTAGATCAAAACTCATGTTTAGGTTCTTCTTATCATGGTACTACTATAGGAGGTGCTAATCAAAGCCAGAGCGATCAAAACCAAGTTTCATGTTTTTCTTCTCATGGTACTACTATTACAGGTGCTAATCAAAGCCAGAGCAATCAAAACCAAGATTCATGTTTTTCTTCTCATAGTACTAATAATATGCTGCTGCATCAACTAGATCAAAACTCATGTTTAGGCCCTTCTTATCATGGTACTACTATTGGAGGTGCTAATCAAAGCCAGAGCAATCAAAACCAAGTTTCATGTTTTTCTTCTCATGGTACGACTATTAGAGGTGCTAATCAAAACCTAGGTGTTGGTATTGGTACGCAGCAACTAGATCGTGCTAATCAAAACCAAGGTGTTGGTATTGGTACGCAGCAACTAGATCAAAACTCATCTTCAGGTTCTGGAAACGTAATGCAGCTACAACCGATAACCCATCAGTTTGATCGGGAAGATAGCTTCGATGTGGAGTTTGATCAGGAAGATAGCTTCAACGTGGATGAGCTTCTTGCAATCCATCCAGTTGAATGA 1698 0.4075 MQRSEAQPRLPPPQGLNVLLVSTDDAIHSCIKNQLSHPHYQIAIFLNCNSALRFLKNDDVDLVLSDFSLKDMDGYEFITQVQHLRKNIPHVVIFEAEISGHEISTAYKLGACYILRKPVSEASDEIRNLWQHVFRWRAQNEASSSLVSSQQESLKRGNEFMNHGEEPSSNKRTRFVWTEERHARFVEVVEQLGKDAVPKNILLAMNEPGVSSSLYPDMSHLHLLEASTTNSPPPPRPQMQRHRYNDQHLACERQIQYKHHHLNFGVTRLVGNEVNNLTSFMQQPSLSSYGRRMHQPADQISNDGNQALGTSQNPSSGSGIINNHRDSFESKEINMLQNSGLGSSPHGTTIRGANQSQSNQNQDSCFSSHSTSNMLLHQLDQNSCLGSSYHGTTIGGANQSQSDQNQVSCFSSHGTTITGANQSQSNQNQDSCFSSHSTNNMLLHQLDQNSCLGPSYHGTTIGGANQSQSNQNQVSCFSSHGTTIRGANQNLGVGIGTQQLDRANQNQGVGIGTQQLDQNSSSGSGNVMQLQPITHQFDREDSFDVEFDQEDSFNVDELLAIHPVE 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0162 565 Pfam Response regulator receiver domain 18 121 IPR001789 GO:0000160
Alju09g0162 565 MobiDBLite consensus disorder prediction 337 368 - -
Alju09g0162 565 SUPERFAMILY Homeodomain-like 171 211 IPR009057 -
Alju09g0162 565 SMART REC_2 16 130 IPR001789 GO:0000160
Alju09g0162 565 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 360 IPR045279 GO:0009736
Alju09g0162 565 NCBIfam myb-like DNA-binding domain, SHAQKYF class 173 211 IPR006447 GO:0003677
Alju09g0162 565 ProSiteProfiles Response regulatory domain profile. 17 132 IPR001789 GO:0000160
Alju09g0162 565 SUPERFAMILY CheY-like 14 148 IPR011006 -
Alju09g0162 565 Gene3D - 168 221 - -
Alju09g0162 565 Gene3D - 17 164 - -
Alju09g0162 565 MobiDBLite consensus disorder prediction 286 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0162 Alju-ChrAlju09 1765200 1767913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0162 13 206 Response Regulator Gene Family AT4G31920 30.144 6.72e-21 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju09g0162 Response_reg 1.2e-13 CL0304