Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0161 ATGCAGCGATCTGAAGCCCAACCTCGTCTTCTTCCTCCTCAGACATTGAAGGTGCTCTTAGTTGGCACTGATGAAGTCACCCAAAGCCGTATTACGAATCAGCTTTCTCATCCTTATTATCAAATCGCTACATGTCCCACTGGTTCTGTAGCCTTAGGCCTCTTAGCAAATGAAAAGATTGACGTTGACTTGGTGCTCATAATATTTGAAGCTGAGAGATTAGGTCATGAGATCACCACGGCTTATAAATTGGGTGCATGTTATATTTTGCGGAAGCCAGTGAGTGAGGCATCTGATGAGGTTAGAAATTTATGGCAACATGTTTTTAGGTGGAGGGCTCAGAATGAGGCTTCTTCTTCTCTTGTTTCTTCCCAACAAGAAAGTCTGAAAAGAGGAAATGAGTTTATGAATCATGGCGAAGAACCTTCTTTTAAAAAACAAAGGCTCGTCTGGGACGAGGACCTCGATGCCCTGTTTGTCAAAGTTGTGAATGAACTTGGCAAAGATGCGGTGCCTAAACGAATCCTTGAAGTTATGAATCAGTATAGACCTCTGCCTTTTCTGACGAGAGAACATGTTGGGAGTCACCTACAGAAATACAGGGAGAAAGAGAAGAAGAGAAGAGTGCTGCATCAACGACGTATGAATAATGCAAATGGAAGGAATGAGATGACGACAGTGAATCAAATTCCTCCCAGATTTGACATTAAGAATCATATCTTGGCTCCACCATTAGTATCATCATCTTCTCACCATGACATGTCGCATCTCCACCTTCTAGAAACTTCCACGACTGATTCTCCTCCTCCTCCTCCTCAGCCCCAAATGCAACAACGTCATTATAATCAACAACACCTTGTCTGCCAGCGGCAAATACAAGATGAACATCATGAACAACACCTTGCTCGCCAGCCAATGCAGTTCGACAACTTTGGTGTAGTCACATCTCTTATTGGAAATGGAAGCAATAACTTGACTTCTATGCATCAACCTGATCGAAAGCCAGTTTTGTCGTTTCATGTTAATACTACTAGACCTGCTATGCATCAACCTGATCGAATTACTTCCTTTAAAAGTAATATGCCGCAGCAACGGCAACCACAAGGTCCTTCCTTTGAAAGTAAGGAAAGTAATATGCTGCAACAGCCACTCATAGCTCCAAACCCGACTTCTGGTTTGCAACAACGAGATCAAAACCCATGTTCAAGTTCTACAATCATAAACCAAAACCAAGCTCTTGGTACTTCTAGCACGCAGCAACTAGATCATAACCCATCTTCAGTTTCTGGAATTGTAAACAAAGACCAACCTCTGGGTTTGACTTCTAGTACGCGGCAACTAGATCAGAACCCATCTTCAGTTTCTGGAATTATAAACCACGACCAAACTCTGGGTACTCCCTTTGGAAGAAGTAGTATGGAGCAACAACCTATAACTCAGAATATGACTTCCAGTACACAGCAACTAGATCAAAACCCATGTTCAAGTTCTAGAATAATAAACCAAACCCAAGCTCTTAGTATGCAGCAACAACTGATAGGTCAGAATTTGACTTCTAGCACGCAGCAACTAGATCAAAATCCATCCTCAGTTTCTGGAATTATAAACCAAGACGAAGTTCTGGGTGCTCCCTTTGGAAGAAGTAATATGGAGCAACTAGATCAAAACCGTTCTCTGGGCACTTCCTTTGAAAAAAGTAATATGGAGCAACAACCGATAACTCAGAATTTGACTTCTAGTACGCAGCAACTAGATCAAAACCCATCTTCATTTTCTGGAATTATAAACCAAGACCAAGCTCTGGGTACTCCATTTGAAAGAAGGAATATGGAGCAACTAGATCAAAACCGTTCTCTAGGTACTTCCTTTGAAAAAAGTAATATGGAGCAACAACCGATAACTCAGAATTTGATTTCTGGTACGCAACAACTAAATCAAAACCCAGGTACGCAGCAACTAGATCAAATCCTATCTTCAGGTTCTGGAATCATAAACCAAAACCATGGTCTAGGTACTTTCTTTGAAAGAATTAATATGGAGCAACAACCGATAACTCCGAATTTGACTTCTAGTACGCAGCAACTAGATCAAACTTCTTGTGCTCCTATAAGAGGTGGTCATGATGGAATGATCACGACAGAAGCAACACATGTAGATGAGTTTGGGGCTGGTCTTTTTAATCAACAGTTTGAGGTTGGTCTTGATGTTCAATCGTCTGATGTTCTTGATATTTTTCCCATCAGTGAAGGCTTCTTGGATGATTACCAAGAGATGAATTATTACCCAGAGATGGATGCTTACCGAGAAATAGATGCTTCTTTCCAAGAGATGAACGAGATGGAGCCATCACAGCTTCCAGATAAATAA 2367 0.4132 MQRSEAQPRLLPPQTLKVLLVGTDEVTQSRITNQLSHPYYQIATCPTGSVALGLLANEKIDVDLVLIIFEAERLGHEITTAYKLGACYILRKPVSEASDEVRNLWQHVFRWRAQNEASSSLVSSQQESLKRGNEFMNHGEEPSFKKQRLVWDEDLDALFVKVVNELGKDAVPKRILEVMNQYRPLPFLTREHVGSHLQKYREKEKKRRVLHQRRMNNANGRNEMTTVNQIPPRFDIKNHILAPPLVSSSSHHDMSHLHLLETSTTDSPPPPPQPQMQQRHYNQQHLVCQRQIQDEHHEQHLARQPMQFDNFGVVTSLIGNGSNNLTSMHQPDRKPVLSFHVNTTRPAMHQPDRITSFKSNMPQQRQPQGPSFESKESNMLQQPLIAPNPTSGLQQRDQNPCSSSTIINQNQALGTSSTQQLDHNPSSVSGIVNKDQPLGLTSSTRQLDQNPSSVSGIINHDQTLGTPFGRSSMEQQPITQNMTSSTQQLDQNPCSSSRIINQTQALSMQQQLIGQNLTSSTQQLDQNPSSVSGIINQDEVLGAPFGRSNMEQLDQNRSLGTSFEKSNMEQQPITQNLTSSTQQLDQNPSSFSGIINQDQALGTPFERRNMEQLDQNRSLGTSFEKSNMEQQPITQNLISGTQQLNQNPGTQQLDQILSSGSGIINQNHGLGTFFERINMEQQPITPNLTSSTQQLDQTSCAPIRGGHDGMITTEATHVDEFGAGLFNQQFEVGLDVQSSDVLDIFPISEGFLDDYQEMNYYPEMDAYREIDASFQEMNEMEPSQLPDK 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0161 788 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 118 581 IPR044841 GO:0003700|GO:0006355
Alju09g0161 788 SUPERFAMILY Homeodomain-like 144 206 IPR009057 -
Alju09g0161 788 Gene3D - 144 207 - -
Alju09g0161 788 FunFam Two-component response regulator 143 208 - -
Alju09g0161 788 MobiDBLite consensus disorder prediction 565 594 - -
Alju09g0161 788 SUPERFAMILY CheY-like 15 116 IPR011006 -
Alju09g0161 788 MobiDBLite consensus disorder prediction 261 282 - -
Alju09g0161 788 MobiDBLite consensus disorder prediction 344 459 - -
Alju09g0161 788 NCBIfam myb-like DNA-binding domain, SHAQKYF class 146 203 IPR006447 GO:0003677
Alju09g0161 788 MobiDBLite consensus disorder prediction 473 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0161 Alju-ChrAlju09 1750468 1753831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0161 17 206 Response Regulator Gene Family AT3G62670 30.508 9.44e-18 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju09g0161 None None None