Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0160 ATGCAGCAATCTGCAGCCGATCATTGTCTTCATCTTCCTCCTCCTTTCTTTACTGAATATTTCCCTAACGGCTTGAAGCTACTCTTAGTGGGCACCGATGAAGATACCCTAAATAAAATTCAGACATATCTCCCACAACCTTATTATGACATTTTTATGTGTCGCAGTGCTGATCTTGCCCTAGGACACCTACAACACCTACAAAAGGAAGGACAAAATTCTTATGACTTGGTTTTCAGTGATGTTGGGTCGGAAGACAAAGATGGCTACCAGTTCATCAGAGAAGTACAACGCTTGAGCTCAAATATAAGCCACGTCGCAATATGTGAGAGTGAAAGATCAAGTAATGAGATCCTGAGAGCATATAAAAGTGGTGCATGTAGTGTTTTGTGGAAGCCAGTGAATGAGCTTGGGGATGAGATTATAAATTTATGGAGACATGTTTGTAGGATGAAGGAACAACGTAAGGCATCTGAGACTCACTTGTCCAATAACAATAATGTGACGCCTGAGACTCATTTATGTGATGTGGAACATATGAGGAGGGAACAACATGAGACGTCTGAGACTTACTTGAATAACAGCGATGATGTGTACCACGGCGATTATATACAGCAAAATAGATCAGTACCACTGGTACTACAGAATCAGGATCAAGGTTGTTCTTCTGTTCTTGCTATTGAAGACCAGTTTTTGAATCATGGCAGAGAATCTCTTCCGAAAAAACGTCGAGTCGTCTGGACAGGTCTCCTCCAAGAATGGTTTATTAATGCTGTTGACCAACTTGGCGGCCCTGAAAGTCATGTGGCTCCATTGTCAACAGTACCTTCATCTCTTATGGGGAATGGAAGCAATAACCTGACTTCTTTTATGAAAGAGCTAAATCTTACCTCGGATTCTTCCTATCAAATTCCAGCTTCAGGTACTTATGTCACTACTACTGGAGGTAACCAACATATTGGTAATTCATTTGGAAGTAGTATGTTGCAGCGACCACAGATTGGTACTTCCTTTGAAAGTAATATACTGCAACCACACCAAAACCAGAATTCTAGTATGTATCAGCTTCATCGATATTTTACCACTAGAGGTGCTAATAATGACGGAATCCAAGCTATGGGTACTTCCTTTGCAAGTAATACTGGTATGCAACAACTAGGTCGAAACCCAACTTCGGGTTCTTCTTCTCATGTTAGTACTAATTATAATGGAATCATAAATCAAAACCAAGCTCTGGGTACTTCTGTTGGAACTAATATGCAAGAGCTATCTAATATGCTGCAGAAACCACAGATAGCTCCAACCCCGACTTCTAGTATGCAACAACTAGATCAAAACACATCTTCAGGTTCTGGAATCATAAACCAAAACCAAGCTCTGAGTACTTCCTTTAGAAGAAGTAATATGCAGCAACAACCGATAACTCAGAATTTGACTTCTGATACGCAGCAACTAAACCAGCACTTGACAGAAGCAACACATGTCATTAGGGATGATGATGATGAATTTTTGGCTTCTCTTAATGATTATCTCTTTGACCCTGTTGAATAA 1551 0.4023 MQQSAADHCLHLPPPFFTEYFPNGLKLLLVGTDEDTLNKIQTYLPQPYYDIFMCRSADLALGHLQHLQKEGQNSYDLVFSDVGSEDKDGYQFIREVQRLSSNISHVAICESERSSNEILRAYKSGACSVLWKPVNELGDEIINLWRHVCRMKEQRKASETHLSNNNNVTPETHLCDVEHMRREQHETSETYLNNSDDVYHGDYIQQNRSVPLVLQNQDQGCSSVLAIEDQFLNHGRESLPKKRRVVWTGLLQEWFINAVDQLGGPESHVAPLSTVPSSLMGNGSNNLTSFMKELNLTSDSSYQIPASGTYVTTTGGNQHIGNSFGSSMLQRPQIGTSFESNILQPHQNQNSSMYQLHRYFTTRGANNDGIQAMGTSFASNTGMQQLGRNPTSGSSSHVSTNYNGIINQNQALGTSVGTNMQELSNMLQKPQIAPTPTSSMQQLDQNTSSGSGIINQNQALSTSFRRSNMQQQPITQNLTSDTQQLNQHLTEATHVIRDDDDEFLASLNDYLFDPVE 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0160 516 ProSiteProfiles Response regulatory domain profile. 26 147 IPR001789 GO:0000160
Alju09g0160 516 MobiDBLite consensus disorder prediction 432 454 - -
Alju09g0160 516 SUPERFAMILY CheY-like 23 159 IPR011006 -
Alju09g0160 516 SMART REC_2 25 141 IPR001789 GO:0000160
Alju09g0160 516 Pfam Response regulator receiver domain 28 135 IPR001789 GO:0000160
Alju09g0160 516 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 384 IPR045279 GO:0009736
Alju09g0160 516 Gene3D - 26 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0160 Alju-ChrAlju09 1729738 1733208 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0160 21 303 Response Regulator Gene Family AT4G31920 25.874 3.54e-15 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju09g0160 Response_reg 2.7e-07 CL0304