Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0130 ATGATGGAGAAACCCCAACTCAGTTTTGGGGTTTCTTTCATAATTTATCGTCTTGTTTTGGTGCTATCTGTGGCGATTTCGGCTTTTTCTCAGTATGATGCAGAGGCGATGAACATTCTAAAGAAGGCGATCAATGCCCCACCTAGTCTCAGATGGACGGACACCGATGTTTGCAAATGGCGACGTGTGGATTGCAACTCTGGAAACCGTGTCATTTCCATACAGATTGGGAACTTGAATTTGCAAGGAATGCTTCCGAAAGAACTCGAGGATCTCTCAGAGTTGCAGATATTTGAATGCCAACAGAATAATCTGACGGGTCATGCTCCATATCTATCCAAGGCGCTACAAAGACTTGTGATCCGAGACAACAAGTTCAGCTCCATCCCCAATGATTTCTTCAAGGGAATGACAAAGTTGCAGGAAGTAAGAATTGGAAGTAACCCATTTTCGCCATGGTCTATTCCAAATAGTCTTAAGGATTGTGTGGCACTCCAGACATTTGTAGCAGCAAATGCGAGTTTGGTTGGAAGGATCCCAGATTTTTTAGGCACTATGCCAGGTTTAGTTTCTTTAGTCTTGAATTCTAATAGTCTTGAAGGTGGCTTGCCTGGCAGTTTTGCGAATAGTTCAATAAAAGAACTTTTGTTGAATTCACAAAATGGTAACTATAAACTTAACGGTACAATTAAGGTGCTGCAGAACATGACATCCTTGAAACAAGTTTGGCTGCATGGTAATTCATTTACAGGTCCAATACCAGACTTGTCAAACCATGATCAGCTGTCTGATGTGAGTTTAAGGGACAACCAATTGGCCTGTGCTGTCCCATCATCTCTCATGGCTCTTCCAAGTTTACAGGTTGTGAATTTGACTGACAATTTCCTTCAAGGGCCCATTCCAACATTTAAATCAGGTGTGGTTGTTGATATGTCTGGGATTAATCGGTTTTGCTCGAACGTCCCACATCAGCAATGTAGTCCTCTTGTGAATGCCTTGCTCTCTATTGTTCAACCTTTAGGATGTCCTGTGAATTTGGCTGAAAATTGGAAGGGAAATGATCCCTGTAATGATAGTTGGACAGGAATAGTGTGCTCTGGGGGAAACATTACAATTGTTAATTTTCAGGATATGGGCTTGTCAGGCTCGATTTCCCCAACTTTTGCCTCACTTACCTCTCTGACTAGATTGCTTCTTGCCAATAATTCACTCACAGGTCCTATACCAAATGAGCTAACTACCATGCCTAACCTACGAGAGCTAGATGTTTCAAATAACAATCTAGGAGGTCAGTTACCGTCTTTTCCTAAAAAAAGCATGGTTATTAGAATAGATGGGAATCCTAATCTTAGAAAACCTCCTGAATCACCTAGCTCAAATTCTGGAGTTAATGGTATTAAGAAGAAACATCAACTTTCTATATTCATTGGGGGTATTGGGGTTGGCTTAATGATTTTACTTCTTATAGTAGTGATGGTGTCTTACATGTTTGTTAAAAAACTTAAGTGTTTTGGCAAGTTTGGTGGTCTAACAATGAAGTTGGTACATCCTCGTGATGGTGAAGTTGGAAAAGCTATGAAGATTTGCGTTGAAGGTGCTGGTGCTCCTAATCAAGCTGATGTCCAAGTCCGGCTTGCTCCTGAAGGAAGAAATTCAGTTGAAACTAGGCTTGCTGGAACTTTCGGGTATCTCGCACCTGAGTATGCAGCAACTGGGCGTGTTACTACAAAGATTGATGTGTATAGTTTTGGAGTAGTTCTGATGGAGATGATAACGGGGAGGAGAGTGCTTGACCATAGCCTACCAGAGGAAGACTTCCACCTGGTTATGTGGTTCGGACGAATGATGCAGAACAACGATTCGTTTCGAAAGGTCATTGATCCTATCATTAATGCAGATGATGAAGCAACCATGTGCAGCATTAGGACTGTCTCAGAATTGGCTGGCCTTTGCTGTGCAAATGAGCCTCATCATCGTCCCAACATGGGCTACGTAGTGAACGTACTATCGCCTCTCGTTCAGGCAGCATGGAAGCCAATCATGGAGTCAAGTTCTGATGATAGTGGTGGCAAGTATGGCATTGATCTTGATATGACTTTGCCTCAAGCACTTAGAATCTGGCAATCTTTGGAAGGACAAAGCAGTTCAATATTTGTCAAAGGATCTGCTTCTCAATCTCTTGTCACAAAATAA 2193 0.4209 MMEKPQLSFGVSFIIYRLVLVLSVAISAFSQYDAEAMNILKKAINAPPSLRWTDTDVCKWRRVDCNSGNRVISIQIGNLNLQGMLPKELEDLSELQIFECQQNNLTGHAPYLSKALQRLVIRDNKFSSIPNDFFKGMTKLQEVRIGSNPFSPWSIPNSLKDCVALQTFVAANASLVGRIPDFLGTMPGLVSLVLNSNSLEGGLPGSFANSSIKELLLNSQNGNYKLNGTIKVLQNMTSLKQVWLHGNSFTGPIPDLSNHDQLSDVSLRDNQLACAVPSSLMALPSLQVVNLTDNFLQGPIPTFKSGVVVDMSGINRFCSNVPHQQCSPLVNALLSIVQPLGCPVNLAENWKGNDPCNDSWTGIVCSGGNITIVNFQDMGLSGSISPTFASLTSLTRLLLANNSLTGPIPNELTTMPNLRELDVSNNNLGGQLPSFPKKSMVIRIDGNPNLRKPPESPSSNSGVNGIKKKHQLSIFIGGIGVGLMILLLIVVMVSYMFVKKLKCFGKFGGLTMKLVHPRDGEVGKAMKICVEGAGAPNQADVQVRLAPEGRNSVETRLAGTFGYLAPEYAATGRVTTKIDVYSFGVVLMEMITGRRVLDHSLPEEDFHLVMWFGRMMQNNDSFRKVIDPIINADDEATMCSIRTVSELAGLCCANEPHHRPNMGYVVNVLSPLVQAAWKPIMESSSDDSGGKYGIDLDMTLPQALRIWQSLEGQSSSIFVKGSASQSLVTK 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0130 730 Gene3D Ribonuclease Inhibitor 329 453 IPR032675 -
Alju09g0130 730 Gene3D Ribonuclease Inhibitor 30 322 IPR032675 -
Alju09g0130 730 ProSiteProfiles Protein kinase domain profile. 370 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0130 730 SUPERFAMILY L domain-like 37 439 - -
Alju09g0130 730 Pfam Protein kinase domain 554 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g0130 730 Pfam Leucine rich repeat N-terminal domain 331 366 IPR013210 -
Alju09g0130 730 Pfam Leucine rich repeat N-terminal domain 31 66 IPR013210 -
Alju09g0130 730 PANTHER OSJNBA0070M12.3 PROTEIN 18 532 - -
Alju09g0130 730 Pfam Leucine rich repeat 387 428 IPR001611 GO:0005515
Alju09g0130 730 SUPERFAMILY Protein kinase-like (PK-like) 553 678 IPR011009 -
Alju09g0130 730 FunFam Receptor-like kinase TMK4 31 323 - -
Alju09g0130 730 Gene3D Transferase(Phosphotransferase) domain 1 528 688 - -
Alju09g0130 730 FunFam Leucine-rich repeat receptor-like kinase 328 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0130 Alju-ChrAlju09 1382317 1385674 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0130 557 676 Receptor kinase-like Gene Family AT5G46330 30.159 2.32e-10 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Alju09g0130 Pkinase 5.8e-09 CL0016