Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0127 ATGATCGATTCACGGTCCTCTCTTTGCTTAATTCTACAGTCTAGATGTGGCATTAATGTGTTTATGTCAATGGGTGAGGAGGTTAAGGCTATCGTTCCAGAGTCTGTCTTGAAGAAGCAGAAGAGGGAAGAGGAATGGGCAGTGGCCAAAACACAGGAGCTTGAAGCTGCTAAGAAGAAGAGAGCAGAGAGCCGTAAGCTGATTTACAACAGAGCTAAGCTGTACGACAAGGAGTATGAGGAACAAGAGAAGGAGTTAATTAGATTGAAACGTGAGGCAAAGCTTAAAGGTGGATTTTATGTTGATCCAGAAGCTAAACTTCTATTTATCATTCGTATCCGTGGTATCAATGCTATGCATCCAAAGACCAGGAAGATTTTGCAGCTCTTGCGTTTGAGACAGATCTTCAATGGTGTATTCCTTAAAGTTAACAAAGCCACAATGAACATGCTGCACAGAGTCGAACCTTATGTGACTTATGGATACCCAAATCTTAAGAGTGTTAGAGAACTTATTTACAAGAGGGGTTACGGTAAGCTCGACAGGCAGAGAATTGCTTTAACTGACAACTCCATCATTGAGCAGGCACTGGGCAAGCATGGAATCAACTGTGCTGAAGATCTTGTCCATGAGATCATAACAGTTGGGCCCCACTTTAAGGAGGCCAACAACTTCCTTTGGCCATTTAAGCTCAAGGCTCCTTTGGGTGGACTGAAGAAGAAGAGAAACCACTATGTTGAAGGAGGGGATGCTGGAAACAGAGAGAATTACATTAATGAGCTTATCAGGAGAATGAACTAG 801 0.4282 MIDSRSSLCLILQSRCGINVFMSMGEEVKAIVPESVLKKQKREEEWAVAKTQELEAAKKKRAESRKLIYNRAKLYDKEYEEQEKELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDRQRIALTDNSIIEQALGKHGINCAEDLVHEIITVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0127 266 SUPERFAMILY Ribosomal protein L30p/L7e 107 266 IPR036919 -
Alju09g0127 266 FunFam 60S ribosomal protein L7 212 266 - -
Alju09g0127 266 CDD Ribosomal_L7_archeal_euk 107 266 IPR035808 -
Alju09g0127 266 Gene3D - 107 209 IPR036919 -
Alju09g0127 266 Gene3D - 210 266 IPR036919 -
Alju09g0127 266 Pfam Ribosomal protein L30p/L7e 108 158 IPR016082 -
Alju09g0127 266 ProSitePatterns Ribosomal protein L30 signature. 126 158 IPR018038 -
Alju09g0127 266 Coils Coil 72 92 - -
Alju09g0127 266 FunFam 60S ribosomal protein L7 107 211 - -
Alju09g0127 266 Pfam Ribosomal L30 N-terminal domain 32 103 IPR012988 -
Alju09g0127 266 NCBIfam 60S ribosomal protein uL30 33 266 IPR005998 GO:0000463|GO:0003735|GO:0022625
Alju09g0127 266 PANTHER 60S RIBOSOMAL PROTEIN L7 30 266 IPR039699 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0127 Alju-ChrAlju09 1367670 1369679 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0127 27 266 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 84.583 1.22e-153 426