Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0090 ATGGACCTCGATATGCGTTGCTGGATACTAGAATTTCTTCTCATGAGTTCCGTTGTTCCAGATACAATCGCCAAGAAGGTATGCACTGTTTTGCCTCTCCCTGGTTTCAATTCGCGGCTGGGGAAAATATTGGCTCTCAGGTCTATTGAATCGGAGGTGGCTAATGCATTGTTTACAGAAACCTCATTAGAATGTCTAGAGCTCATTGAAGAAATCGACTGTCTTGATAGCACTGCAATCACACAAGCGATGAAGGAGGCTTATTGTGCTGTTGCCGTGGAGTGCAGTGTTAGGCACCTTGATCCATGTCCAGGTAAGAACACCCACGGCTTGTTTGACGATGCTGTTAATAAGACATGGAGGGGCCGAATTCGGAAAATGATGGAGGCGATGGTGTTGTCGTCGTCGTCAGGGAAGATATGTCACTTACTTACGCCTGAGTTGATTGAGTGGAAGGACGTCATTGAGTCTGCACGTTGGGACGCAGAGGTATGCGAGAGATTGGCAAACATGAATACTAGAAAAAATGCCCTCGATAAGGTTAGGGTTTATCTGGAAGAAACCAGGGCATCCATGGGCCCTTCTTATCTTGAGTCAGCAGCTTTGTTGTCTGAAGACGAGGGCTTCAGAAATTCAAGTGGGGATAAGATTGGTGACGCAGAGCTTGCTGCTAGTATACCCGATGAAGGTCGTGATAAGATTGTTTCTGAATCTGCCTTGGTCATTGATCGGATGAATATGTGTGAAGGAAGGTTACATTGTTCAACTAACAGGACTGAGGAGGGTTTAGTTGTGTCTGATGGAAGTGCATTGCAAAATGCTGCAATCTGCATGGAGAAGGCGCCAGAGACAGGTGGGAATCAAGATAGCGAGCAATTGGGTGAGACTGACTTGACTCAAAGGATAAATGAAGCAATTCGAAAGGGCAAGATGCCTCTTGAAGATAATCAAGATGTGCCCTCTACACGTAGAGGAGTTATAATTATAGATGCTGGGAAAGTAGGGCCAGCGACAGTTTGTAGCAAAGATCATAATGCGTCTAACATTCAAGCTGAAAAACTTCAGAAATCTCTTGCGTCAAGTTCTTTGGAGCTGCAACCATTGGTGAAGGATCCTCTTCCTGATGCATTACATAAATCTGACCTTGTAAGATCTGAATTAGCAACTAAGGCTGTGAATCACGAGCCTCCTACTGAAAATCAGGGTACTGCTGTAAATGTACCTGAACAAAATGCTTGCTGGAGCATGGTGCCATATCAACCTATCGATGATAATTTAAAGGAACAGCCTTCTGCTAATCGCAGTAATTCTCGACTTCCTGGCTGGATGGAACGAGATAGTACTGCCCATACTTATGAGTGGGGTGATTCATTTAGTGACTTTCCTCGGGGAAGCCCTAACAAAAGGAGGAAAAAGGTAAAATGGAGTTCTGAAGAAGAGGATGCATTAAGGGAGGGTGTGAAGAAGTTTGGCAGAGGAAGCTGGAAGCAAATCCTAAGATTTCACAGCGAGATATTTAACAAGGCAGGAAGAACAGAAGTTGATTTGAAGGATAAATGGAGAAATTTGATACGGTGGCCTTGA 1584 0.4451 MDLDMRCWILEFLLMSSVVPDTIAKKVCTVLPLPGFNSRLGKILALRSIESEVANALFTETSLECLELIEEIDCLDSTAITQAMKEAYCAVAVECSVRHLDPCPGKNTHGLFDDAVNKTWRGRIRKMMEAMVLSSSSGKICHLLTPELIEWKDVIESARWDAEVCERLANMNTRKNALDKVRVYLEETRASMGPSYLESAALLSEDEGFRNSSGDKIGDAELAASIPDEGRDKIVSESALVIDRMNMCEGRLHCSTNRTEEGLVVSDGSALQNAAICMEKAPETGGNQDSEQLGETDLTQRINEAIRKGKMPLEDNQDVPSTRRGVIIIDAGKVGPATVCSKDHNASNIQAEKLQKSLASSSLELQPLVKDPLPDALHKSDLVRSELATKAVNHEPPTENQGTAVNVPEQNACWSMVPYQPIDDNLKEQPSANRSNSRLPGWMERDSTAHTYEWGDSFSDFPRGSPNKRRKKVKWSSEEEDALREGVKKFGRGSWKQILRFHSEIFNKAGRTEVDLKDKWRNLIRWP 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0090 527 PANTHER MYB TRANSCRIPTION FACTOR 1 525 - -
Alju09g0090 527 MobiDBLite consensus disorder prediction 454 478 - -
Alju09g0090 527 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 467 527 IPR017930 -
Alju09g0090 527 MobiDBLite consensus disorder prediction 463 478 - -
Alju09g0090 527 SMART sant 471 526 IPR001005 -
Alju09g0090 527 Pfam Myb-like DNA-binding domain 472 523 IPR001005 -
Alju09g0090 527 Gene3D - 465 525 - -
Alju09g0090 527 ProSiteProfiles Myb-like domain profile. 467 524 IPR001005 -
Alju09g0090 527 SUPERFAMILY Homeodomain-like 469 525 IPR009057 -
Alju09g0090 527 CDD SANT_TRF 473 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0090 Alju-ChrAlju09 1007730 1010838 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0090 475 524 Single Myb Histone (SMH) Gene Family AT1G15720 60.000 2.32e-09 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju09g0090 Myb_DNA-binding 7.3e-10 CL0123