Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0055 ATGCTTCTCGCTAGTGCATCTCTTTCCTCCCGCGACGGCGCCAGGGCCACTCTGATCTCTCACGGCTCCTCTCGCTCTCTCGGTCTTCCATTCGCTCGGAGAACGTGTGTCTTCGTTCTCCGTCAAGATATGGAATATGCTCAAGAATTCCGAGGTTTTCGCACGATGATGAATTTGGAAGGGGAAGTAGACGAAGAGTTTGTCAGGAACGTCGTGGAGAAACCAGATCCTGTCCGGTCAGAAATTATATCATCTTCTCAGAGAGATGAAACTGAAAATAACGACCACGTGATGTCTCCTAGGGCATTCGTTTTGTCATTTGATGACTCGAAGGTAGAACCAATCATATCGAAACAAGAAGAACATAATACATTGAAACATCGTTGTTCGTCAAAAAGAATTAGAGCGAGGCATAACGCCGAACCGATGAGTAAGAAGAAAAGAAGGTCTTTGGAGGAAGTAGAGGATCATATAATGGCAGAGAGAAGACTGAGACAACAAATTACAGAAAAGTTCATTGCATTTTCTGCAACTATTCCCGGCTTGAAGAAGTTGGACAAATTGACTATACTTGACGAAGCTATCAAATACATGAAGCAACTTCAAGAGCGTATAAGAGAACTAGAGAAAGATCCGTCATTGGCATCCAGGAAGAGAATTGAGTTTTATGAGAATGACGAAACCTTATGTGTAGTGAATGAAGTACTGCCTAAGATTGAAGTTAGGGTTTCAGAGAACAAGCAAGTGTTTATGGGAATATATTGCAAGAAACAGAAGGGCATTGAGTTCCAAATATTGAGCTTGCTTGAGAACTTTCATCTGTGTCACCAGTAG 834 0.4245 MLLASASLSSRDGARATLISHGSSRSLGLPFARRTCVFVLRQDMEYAQEFRGFRTMMNLEGEVDEEFVRNVVEKPDPVRSEIISSSQRDETENNDHVMSPRAFVLSFDDSKVEPIISKQEEHNTLKHRCSSKRIRARHNAEPMSKKKRRSLEEVEDHIMAERRLRQQITEKFIAFSATIPGLKKLDKLTILDEAIKYMKQLQERIRELEKDPSLASRKRIEFYENDETLCVVNEVLPKIEVRVSENKQVFMGIYCKKQKGIEFQILSLLENFHLCHQ 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0055 277 PANTHER BHLH TRANSCRIPTION FACTOR 82 274 - -
Alju09g0055 277 Coils Coil 151 171 - -
Alju09g0055 277 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 152 201 IPR011598 GO:0046983
Alju09g0055 277 Pfam Helix-loop-helix DNA-binding domain 157 202 IPR011598 GO:0046983
Alju09g0055 277 MobiDBLite consensus disorder prediction 128 144 - -
Alju09g0055 277 Gene3D - 144 212 IPR036638 GO:0046983
Alju09g0055 277 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 216 IPR036638 GO:0046983
Alju09g0055 277 Coils Coil 191 211 - -
Alju09g0055 277 SMART finulus 158 207 IPR011598 GO:0046983
Alju09g0055 277 MobiDBLite consensus disorder prediction 128 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0055 Alju-ChrAlju09 675164 676557 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0055 63 274 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22760 32.258 2.06e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju09g0055 HLH 9.8e-09 No_clan