Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0053 ATGGAGGAGCCATGGCAGACTAGTTTTCCTCCACCTCTTGATATGGAAGGCGCTGAAGTAGATTTCCGCGAGCAGTACAATGAAATGATGTGTTTGGATGAGGAGGAGGAAGAGTTTCTGAGAAGCATTATGCAGCAACCAGCTGGTCATCATTATCAGTCTTCTCAAACAGAAACTGAGAATAACGACAGTTTCAGCAAGCATGGTTCCAAGGATAAAAACGACGTTGTCGTGGTGTCTCCTAGGGCATACATTCTGTCATTTGATACCCATGACATGGAACCAATAATCTCAAAACAGCAAGAGTCTAAGAAACAATGTTCGTCGAAAAGAATCAGTGCGAGGCATAACGCTGAACCAAGTAAGAGGAAAAGAATTAGGTCTTCGGAGAAAGTAGTGGATCATATAATGGCAGAGAGGAAACGGAGACAACAAATTGCAGAAAGGTTCATTGCACTTTCTTCAATTATTCCGGGCATGAAGAAGGTGGACAAAGCCACTGTACTGGACGAAGCTATCAAATACATGAAACAACTTCAAGAGCGTATAAGAGAACTAGAGAAAGAGACATCAATGTTATCCAAAAAGAAAACTGGGCTTTGTGAGAAGAATGGCCATTTCTGGGAAGTGATTGAAGAATTTCCTAAGATTCAAATAAGAGTTTTAGAGAATCAAGTGCTTCTGGGAATCCATTGCGAGAAACAAAAGGGCATCGAGTTCAAAATACTGAATTTACTTGAGAATATTCATCTCCATGTCTCCAGTAGTAGTGTTTTGCCATTTGGGAATTCCACTCTTGGCATTAACATTATTGCTCAGATGGCTGATGAATATAGGATGCCATTGAATGAAGTGAGGAAAAACTTGCGACAAATTCTATTAAAGTCATGA 891 0.4029 MEEPWQTSFPPPLDMEGAEVDFREQYNEMMCLDEEEEEFLRSIMQQPAGHHYQSSQTETENNDSFSKHGSKDKNDVVVVSPRAYILSFDTHDMEPIISKQQESKKQCSSKRISARHNAEPSKRKRIRSSEKVVDHIMAERKRRQQIAERFIALSSIIPGMKKVDKATVLDEAIKYMKQLQERIRELEKETSMLSKKKTGLCEKNGHFWEVIEEFPKIQIRVLENQVLLGIHCEKQKGIEFKILNLLENIHLHVSSSSVLPFGNSTLGINIIAQMADEYRMPLNEVRKNLRQILLKS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0053 296 Coils Coil 169 196 - -
Alju09g0053 296 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 130 179 IPR011598 GO:0046983
Alju09g0053 296 MobiDBLite consensus disorder prediction 47 63 - -
Alju09g0053 296 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 133 196 IPR036638 GO:0046983
Alju09g0053 296 SMART finulus 136 185 IPR011598 GO:0046983
Alju09g0053 296 MobiDBLite consensus disorder prediction 46 73 - -
Alju09g0053 296 MobiDBLite consensus disorder prediction 96 128 - -
Alju09g0053 296 PANTHER BHLH TRANSCRIPTION FACTOR 38 294 - -
Alju09g0053 296 Gene3D - 122 200 IPR036638 GO:0046983
Alju09g0053 296 Pfam Helix-loop-helix DNA-binding domain 134 180 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0053 Alju-ChrAlju09 626317 628963 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0053 134 293 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 41.176 1.33e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju09g0053 HLH 1.5e-11 No_clan