Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju09g0018 | ATGGGCAAATCCAGCAAGAAATCAGCTCCCAAAGTTGATTCTGCTCCGGCTGTTGTTCCGCCTTCGAAGTCTGCAAAGAAAGGCAAGAGGGAAGCCGAGGATGAACTTGAGAAGCTAGTGAGTGCAAAGAAGCAGAAGAGAGATGAAGTTGCTGATAAGAAGAGGGCCAAGGTGCAGAAAAACGAAAAAGAAAGCAGTTCAGATGATGATTCTTCATCAGAATCCGAGGAAGACAAGAAAACTGTCACAAAAGCTGTTCTTCCATCAAAGACACAACCTTCTAAGAATGGCACTTTAAGTGGCCGGGTGAACAAAGGCAAGCCAGCTAGTAGCTCCACTTCTGAATCCTCTGATGATGACTCCGATAGTGGTGATGCTGGAAAATCCAAGGTTGCCTCTGCTGCTGGTAAGAATGGAACTCTTTCAACAAAGAAGAAAGTTGAGTCAAGTCACAGCTCAGATACTGAGAGCAGTTCAGATGAAGAAAATGTTGTGAGAACTAAAGTTGCCCCGCTATCCAAGAAGACACCTGTTGCTGCAGCTAAGAAAGTTGAATCAGATTCAGAACCTGACAGCAGCTCTGATGAGGATGATGTCCCTACAAAATCATCCAAGAAGTTGCCTGCTGCTCCTGCCGCAGGTAAAAGTAAACCTGCCAAAAAAATTGAGTCTAGTGATGACGCAACCTCTGATAGCAGCTCAGATGATGATAATCTTGCGACAAAGAAGTTGCCTGCAACAACAGTTCCTTCAAAGAAGAAAGTTGAGAGCAGTGAAAGCTCTGAAGATGAATCAAGTGAAAGCTCTGATGAAGATAATGGTATGAAGTCTTCTGTCAAAGCAGTTTCCAAGCCTTCCATTGTTTCAAAGAAAGTTGAATCAAGTGAGAGATCAGAATCTGATAGCAGTAGCTCTGACGAAGACAACGAAAATAAAAAGGGAGTCCACAATGCTTCCAGTATCAAGCCAGCAAAGGCTTCTGATAAGAATTCCAAGTTAAAGGATAGATCTGACGAGACTGATGATGATGATGAGGAATCCTCTGACAGTGATTCTGAGGATGAGAAGAAAACTGCTCCTAAGGCTAATGCTAAAGCTGCAACTGCTGTGAAGACAGTAAAAAAGGAGTCTAGTGAAAGTGCATCTGAAGATGACTCTTCGGAAGATGAGGATAAGATGGATGTTGATGAAGGCAGTAGTTCTGAAGAAAGTGAGGAGGAGCCACAAAAGAAGAAGCCTGTGAAAGCTATTAAGGAAAGCAGTGAAAGTTCAGAGAGCTCAGATGATAGCGAGGATGACAATGAGACACCCTCCAAGACTCAGAAAAATGCTAAGGATGTGGAGATGGTTGATGCTGCATCAGCAAAGTCAAATGGAAAGAGACCTCCTAGCACCCCGGCTACTCCAAGAGCACAAAATGCCACATCAAAGACTCTGTTTGTTGGAAATTTGTCATATAAAGCAGGACAGACCGATGTGGAAAACTTCTTTAAAGATTGTGAAGTGGTTGTGGTCCGTTTAGCCTCAGATGAAAATGGCAGATCTAAAGGTTTTGGGCATGTTGATTTTGCCACAGAGGAAGCAGCACAAAAAGCCCTTCAGTTGAATGGGGAAGAATTGCTTCAGCGTCCCGTGAAACTTGATTTAGCTCGTGAAAAGGGAGCATATACCCCCAATAGCAGCAACTGGAGCAATTCATTCCAGAAAGGAGGACAGGCTCAAGCTCATACATTATTTGTTAAGGGTTTTGATACATCCCTGGGGGAAGATGAGGTGAGAACGAACCTGACAGAGCATTTCAGCTGTGGAGAGATTACAAGGATATCAATTCCTAAAGATTACGAGACTGGTGCTGTCAAGGGGTTTGCCTACATGGATTTCAAGGATGGTAATGCCCTTAACAAAGCACTGGAATTGAATGGAAGTGAGCTTGGAGATGGATATTATTTGACTGTTGATGAGGCAAGACCTCGAGCTGATAATCAAGGTTCCAGTGGTGGTAGAGGTGGTGGAAGGAGTGGTGGTGGTCAATTTGGGGCTAGGGGTGGCAGTCAATTTGGGGGCAGGGGTGGCAGAGGTGGTGGTGGTCAATTTGGGGGAAGAGGTGGTCGTGGAAGAGGTGGCGGCGGCGGCAGGGGGCGTGGCACACCCTATAAACCGAGTCTTGCTGCTGCAGGCACAGGGAAGAAGACCACATTTGCAGATTAA | 2208 | 0.4511 | MGKSSKKSAPKVDSAPAVVPPSKSAKKGKREAEDELEKLVSAKKQKRDEVADKKRAKVQKNEKESSSDDDSSSESEEDKKTVTKAVLPSKTQPSKNGTLSGRVNKGKPASSSTSESSDDDSDSGDAGKSKVASAAGKNGTLSTKKKVESSHSSDTESSSDEENVVRTKVAPLSKKTPVAAAKKVESDSEPDSSSDEDDVPTKSSKKLPAAPAAGKSKPAKKIESSDDATSDSSSDDDNLATKKLPATTVPSKKKVESSESSEDESSESSDEDNGMKSSVKAVSKPSIVSKKVESSERSESDSSSSDEDNENKKGVHNASSIKPAKASDKNSKLKDRSDETDDDDEESSDSDSEDEKKTAPKANAKAATAVKTVKKESSESASEDDSSEDEDKMDVDEGSSSEESEEEPQKKKPVKAIKESSESSESSDDSEDDNETPSKTQKNAKDVEMVDAASAKSNGKRPPSTPATPRAQNATSKTLFVGNLSYKAGQTDVENFFKDCEVVVVRLASDENGRSKGFGHVDFATEEAAQKALQLNGEELLQRPVKLDLAREKGAYTPNSSNWSNSFQKGGQAQAHTLFVKGFDTSLGEDEVRTNLTEHFSCGEITRISIPKDYETGAVKGFAYMDFKDGNALNKALELNGSELGDGYYLTVDEARPRADNQGSSGGRGGGRSGGGQFGARGGSQFGGRGGRGGGGQFGGRGGRGRGGGGGRGRGTPYKPSLAAAGTGKKTTFAD | 735 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju09g0018 | 735 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 477 | 552 | IPR000504 | GO:0003723 | |
Alju09g0018 | 735 | SUPERFAMILY | RNA-binding domain, RBD | 466 | 565 | IPR035979 | GO:0003676 | |
Alju09g0018 | 735 | CDD | RRM2_NUCLs | 577 | 655 | IPR034350 | - | |
Alju09g0018 | 735 | MobiDBLite | consensus disorder prediction | 24 | 84 | - | - | |
Alju09g0018 | 735 | MobiDBLite | consensus disorder prediction | 180 | 203 | - | - | |
Alju09g0018 | 735 | SUPERFAMILY | RNA-binding domain, RBD | 565 | 684 | IPR035979 | GO:0003676 | |
Alju09g0018 | 735 | Gene3D | - | 452 | 560 | IPR012677 | - | |
Alju09g0018 | 735 | MobiDBLite | consensus disorder prediction | 85 | 117 | - | - | |
Alju09g0018 | 735 | MobiDBLite | consensus disorder prediction | 1 | 474 | - | - | |
Alju09g0018 | 735 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 578 | 646 | IPR000504 | GO:0003723 | |
Alju09g0018 | 735 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 479 | 545 | IPR000504 | GO:0003723 | |
Alju09g0018 | 735 | SMART | rrm1_1 | 478 | 548 | IPR000504 | GO:0003723 | |
Alju09g0018 | 735 | SMART | rrm1_1 | 577 | 653 | IPR000504 | GO:0003723 | |
Alju09g0018 | 735 | Coils | Coil | 22 | 56 | - | - | |
Alju09g0018 | 735 | MobiDBLite | consensus disorder prediction | 290 | 315 | - | - | |
Alju09g0018 | 735 | Gene3D | - | 561 | 674 | IPR012677 | - | |
Alju09g0018 | 735 | MobiDBLite | consensus disorder prediction | 458 | 474 | - | - | |
Alju09g0018 | 735 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 576 | 657 | IPR000504 | GO:0003723 | |
Alju09g0018 | 735 | MobiDBLite | consensus disorder prediction | 382 | 403 | - | - | |
Alju09g0018 | 735 | MobiDBLite | consensus disorder prediction | 657 | 735 | - | - | |
Alju09g0018 | 735 | MobiDBLite | consensus disorder prediction | 147 | 163 | - | - | |
Alju09g0018 | 735 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H | 577 | 706 | - | - | |
Alju09g0018 | 735 | MobiDBLite | consensus disorder prediction | 404 | 424 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju09g0018 | Alju-ChrAlju09 | 223102 | 231159 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju09g0018 | 469 | 646 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 28.962 | 3.89e-09 | 58.2 |