Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0004 ATGTCTAACTCTGACGGAACTACCGCCAACGGTAACGGCGCAATCATTGACCCGCAGAGGCAGCAGCAGCAGTCATCTTCCGGGAACGGCACTCTCGCCGTCAAGAAGCCGCCGTCTAAGGACCGTCATAGCAAGGTCGACGGCCGAGGTCGCCGTATTCGCATGCCGATCATATGCGCCGCACGTGTCTTCCAGCTCACGCGTGAGTTGGGTCACAAATCCGACGGTCAAACTATCGAGTGGCTCCTCCGCCAGGCCGAACCCTCCATCATAGCCGCTACCGGCACCGGCACTACTCCTGCGAGCTTCTCCACCGTTTCGGTCTCCGTACGCGGAGGCGGCGGCGGAGGAGGTTCGAACTCGCTGTCGTCGTCTTCTACTACTGCTACTTCTCTTGACCATAAGCCCGCCCTGCTGGGTCCGACGCCCTTCATACTCGGAAAGCGCATACGGACCGCCGATGATGACGCTGCTAAGGATGACGGCGTCTCCGTGGGACCCACTGTTGGGTCAATAGTGGGGCCGACGACGCCAGCTGGGTTGTGGGCACTTCCGGCGAGGCCTGACTTCGGCCAGGTATGGAGCTTTGCTGCAGCTGCAGCCGCTCCTCCGCCTGAGATGGTGGTGCAGCCGGCGGGGGGGTCGGTGTCGCAACAGCAGCATGCTTCATTTTTCGTCCACCATCATCAGCAACAACAAGCCATGGGCGAGGCGTCGGCGGCTAGACTGGGTAATTACCTTCCAGGACATCTGAATTTACTGGCTTCGTTGTCGGGTGGGCCTGGAAGTTCAGGCCGGAGAGATGATGAGCCTCGATAA 819 0.6044 MSNSDGTTANGNGAIIDPQRQQQQSSSGNGTLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGGGGGSNSLSSSSTTATSLDHKPALLGPTPFILGKRIRTADDDAAKDDGVSVGPTVGSIVGPTTPAGLWALPARPDFGQVWSFAAAAAAPPPEMVVQPAGGSVSQQQHASFFVHHHQQQQAMGEASAARLGNYLPGHLNLLASLSGGPGSSGRRDDEPR 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0004 272 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 11 248 IPR005333 GO:0003700
Alju09g0004 272 Pfam TCP family transcription factor 39 115 IPR017887 -
Alju09g0004 272 MobiDBLite consensus disorder prediction 1 33 - -
Alju09g0004 272 MobiDBLite consensus disorder prediction 36 51 - -
Alju09g0004 272 ProSiteProfiles TCP domain profile. 39 93 IPR017887 -
Alju09g0004 272 MobiDBLite consensus disorder prediction 113 133 - -
Alju09g0004 272 MobiDBLite consensus disorder prediction 1 51 - -
Alju09g0004 272 MobiDBLite consensus disorder prediction 113 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0004 Alju-ChrAlju09 43567 44385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0004 5 272 TCP Transcription Factor Family AT5G23280 62.362 4.08e-98 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Alju09g0004 TCP 1.6e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g0004 09 43567 44385 Alju09g0004 09 43567 44385 ECH