Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2862 ATGAATTCGTTTTCTGCTGAGAAAATAACTGGATTGCAAACATTGGGTCAGTTGTGTTGCTTCCATGGGAAATTGGGAACCAATGAGGGAGCAGATCTTGATATCCACGTGGCAGAAGGAGAGACACTATCCAAGGACAAAAAATCAGCAAGGAAATCCACATCCAAGAGAAGCACCAATGGGAAGCTGCTGAGCTGTACAAATCCTCATCCACAGCATCACAAGAAATCCTCCCCCTCTTCTATAAACTTTACATCAACGCTTCATTCTTACCACTACACACACGAACATCATATCAGTATCATCATTGCCGCCATGGCCACCTCTGCTATCCATCAATCCGCCTTCATCGGCCAGACTGGGTTGAAGCAAGTCAACGAGCTCGTCCGCAAGGCCGGTGACTCCAGCAATGGCCGCTTCACCATGCGCCGCACCGTTAAGAGTGCTCCTCAGAGCATCTGGTATGGCCCTGACCGTCCCAAGTACTTGGGCCCCTTCTCCGACCAAATCCCGTCATACCTGACCGGCGAATTCCCCGGCGACTACGGATGGGACACCGCCGGGTTGTCCGCAGACCCCGAGACCTTCGCCAGAAACCGTGAGCTGGAGGTGATTCACTCCAGATGGGCGATGCTTGGCGCATTGGGATGCGTGTTCCCTGAAATCCTGGAGAAGAACGGCGTCAAGTTCGGCGAGGCGGTGTGGTTCAAGGCTGGTGCCCAGATCTTCTCCGAGGGTGGCCTTGACTATCTCGGCAACCCTAACCTCATCCACGCTCAGAGCATCCTCGCAATCTGGGCTTGCCAGGTTGTGCTGATGGGGTTCGTGGAAGGGTACAGGGTCGGTGGAGGGCCTCTTGGAGAGGGGCTTGACCCGATATACCCGGGTGGGGCTTTTGACCCGCTTGGACTGGCTGATGACCCGGATGCATTTGCAGAGCTGAAGGTGAAGGAGATCAAGAATGGGCGATTGGCCATGTTCTCCATGTTTGGCTTCTTCGTGCAGGCCATTGTCACCGGCAAGGGCCCCATTCAGAACCTTGCTGACCATGTCGCCGACCCTGTTGCCAACAATGCCTGGGCGTATGCCACTAACTTCGTCCCTGGACAATGA 1113 0.5454 MNSFSAEKITGLQTLGQLCCFHGKLGTNEGADLDIHVAEGETLSKDKKSARKSTSKRSTNGKLLSCTNPHPQHHKKSSPSSINFTSTLHSYHYTHEHHISIIIAAMATSAIHQSAFIGQTGLKQVNELVRKAGDSSNGRFTMRRTVKSAPQSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLADHVADPVANNAWAYATNFVPGQ 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2862 370 Pfam Chlorophyll A-B binding protein 171 336 IPR022796 -
Alju08g2862 370 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 108 369 IPR001344 GO:0009765|GO:0016020
Alju08g2862 370 SUPERFAMILY Chlorophyll a-b binding protein 153 367 - -
Alju08g2862 370 Gene3D Chlorophyll a/b binding protein domain 161 363 - -
Alju08g2862 370 MobiDBLite consensus disorder prediction 43 81 - -
Alju08g2862 370 FunFam Chlorophyll a-b binding protein, chloroplastic 161 363 - -
Alju08g2862 370 MobiDBLite consensus disorder prediction 56 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2862 Alju-ChrAlju08 53773625 53775590 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2862 83 370 Chloroplast and Mitochondria Gene Families AT3G27690 80.969 3.08e-176 490