Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2861 ATGTCCTCGCAGCCAAACGATGTTGTCGAAGCTGATCTCAATACTGCACTGCATGCTTCCTTGCTCGTCACTAGCAAGAAGTACGGTCGGCTATGGCGCCGGACCTTATACATTCGAATCTTCATCTCTCTCACACGAACAGCAAGAACTCCTACTCCCACGCGCGAATCTGAGCAATTACCTCATTACACCCCATTACCCACGAGAACTTCCTCGGCTAAATCTTCTTGTGCGATTGATGTTGCCTCCTCTGATAACGAAGAGGAGGATCCTGTGCGTTTAGAACAGCACATCAAGGACAATATTGCTCGTATTGTTAAGGACAGGGACTTGGAATCGCTTCGCGAGCTCGGAGGAGTCGAACGTGTTCGCTCAGTTCTTTGTCATCTTGCTTCAGTGGGAGGCAATATTGTTAATGGGAACCATCAAGTGTTCGAGACCACTAACCAAGTTCCGGGACGGAGCCTCTCCTACTGTTTTGTGAATAGTTGCAAACGCTATAGTTACACAATTTCACTACTTATGACCTCAGCTGTGTTGTCCTTGGCCACAGATATCAAGCAGGAAGGACCTAAATGTGGTTGGCATGATAGTGCTGCCATACTTGTTGCCATAATTGTGATTATCTCTTTCACTTCTGTGGCAAACTTTTGGCGTGAAAGAAAGATGCTAAAATTATCAGAGAAGAAAAGTGAGTTGAAGTTTAATGTTGTTAGATGTGACACCCACTTAATGGTAGCCATATCTGATATTATGGTTGGTGATACAGTGTATCTTAAGATGGGTGACGAGGTTCCAGCTGATGGTTTGCTTCTAAACAATGGAAATGAGACACAGGATATATTTCTCTTGTTTGGTTCAGAAGTATTGTTTGAGGGTGAAACTTTGATGCTTGTGACATCAGTTAGAAACAAAAAATCAGTTGACATGCAGAATTGGGCGGCAAATAATCCTGAAAAGAATATGCCGTTGGAAAGTCGAATTGAGAGGCCGCTTTCTTTCTTCGACAAAATTGCCCTTCTTATGTCTGTGTTGGTTATGCTTGTGGTGCTCATTCGTCTACTTTGCAAGAAAAATGGGGACAACAGTGGATTACCAGAGATTAAGGGTAAGGCTTCAGTTGACTTACTGATGAAATTGATGGAGAGAATTTTCTTGAAGCCCCAAGGAAAAGTTTCCATTTTAACTAGCCTTGTAACTGTTGCAATAGTAAGTATGCAACATGGGGTACCACTTATGGTTACAATTTCTCTCAAATACCAAATGGACAAGGTGGTATCAAACCAAGTTGTAGATCTTCATGATTTATCGTCTTGTGCAACAATGGGACTGGTTACAGTCATATGTGTTGATGCATCTGGAGGGCTAATGTCTAAACTGATGGAGGTTAGTAGAATTCGGATTGGGGAGAGAGATATCAGCAATATTAATGATGTGACATCCGAAATTAATCAAGCTGTGCTTGACAAACTTGAGCAAGGAGTCAGCGTGTCTGTTCTTGCTCCTGAATTTATTCTCTCTCCAGTGTCCAATTCACTTATTTCTTGGGCAGAAACCACTTGGGACGTGAACAGAGAATCTTTTGGTGAGAACCTTACCATTCTTGAGCATAGCAGACAAAACTTAAGGGGAGATGGAAATGGAGTTTTAGTGAGAAAAGTTGGAGACCATGAAGAACATCTGCACTCGCACTGGAGTGGGGCAGCATCTATAATACTGGAAATATGTTCACACTATTATGATAGTGATGGTAAATGCCATGGCATAACAAATCAGAAAATGAAATTTGGGGAGGTCATTAAAGAAATGGAGGATAGCGGCCTGGAGCCTATTGCACTTGCTTATCAAAACACACAGGCTCAGGTGCTTCAGCAAGATGGACTAATCTTGGTAGCTCTGATAGGTCTCAAACCCTCGTTTGAAGAGACAAAGAAAGCCTTGGCACACCTCAAAAACGATGGAATCAAGATCAAATTGGTGTCAAGTCAAGACATTGCAGCAGTGAGAGCACTAGCTTGTGAACTAGGAATACAAGTTCCGGATGAAGATGGTGTAATTCTTGAAGGAAAAGAAATTCAAGATTTGAACGGCACAGCCAGGTCAAAGAAATTGGATGGAGCACTGGTAATGGGAGGTTTCCTTCCTCATGACAAGGTTCTCATGATTAGGTGTTTGCAAGATGAAGGTCATGTGGTTGCATTCTTTGGGGCGTTGACAGTAAGTGATGCTGCAGTTCGAGAGGCGGCTGACATAGTGATAGATGCAAAGTCTCAGAACCCAAGATACGATATAGAGAGTTCGAATATATCTGTTGGAGGTTTCAGTGCAATAACCACAATTGTGAGGGCTGGTAGATGTCAATATCGCAATATTCAAAAGTTCATTCAACTTCAGCTCACTGCTAGCTCATCTGGGTTATTCATAACCTTGATTACAACAATGTGCACCGGGCAGTCTCCCCTGACGACCATTGAATTGATTTGGGTGAACACAATAATGTGCCTTTTGGGAGGCCTAATGATGTTAATGAATTTAGACATCAAGGAGGATCAGCATGCCAGCCAACCAAATGATCGGAAGCAGTCACTTATATCCCAAGAAGTCTGGAGAGACATAGCTATTGACGTCTTGTGTCAGTCTTCTGTTTCCTTGATATTTCTTTTTGGAGGGCAAGTTACAGACAGAACAAACCAAGTTAGGAAGACTATGATCTTCAACATATTCATGCTATGTCAGTTCTTCAATCAGCTCTACGTCTTGGGCCTAGTGAAAAGGGGAATTTTCAAGATGGTTCTTCTGAGATACTGCTTCTTGGTTGCATTAGGGGTTTGCCTGGTTATGCAGATTCTGGTGATTCAATATGCAAATGGCCTAGCAGATTGCATGAGGCTGAATGCAACTCAATGGGTTATCTGTATCGTGGTTAGTGCGCTTTCATGGTTAATTGAGTGGCTATTGAAGAAGTTTCTTACTTGGATATTTAATCATTTTCATCCCTGTACCATATAA 3009 0.4221 MSSQPNDVVEADLNTALHASLLVTSKKYGRLWRRTLYIRIFISLTRTARTPTPTRESEQLPHYTPLPTRTSSAKSSCAIDVASSDNEEEDPVRLEQHIKDNIARIVKDRDLESLRELGGVERVRSVLCHLASVGGNIVNGNHQVFETTNQVPGRSLSYCFVNSCKRYSYTISLLMTSAVLSLATDIKQEGPKCGWHDSAAILVAIIVIISFTSVANFWRERKMLKLSEKKSELKFNVVRCDTHLMVAISDIMVGDTVYLKMGDEVPADGLLLNNGNETQDIFLLFGSEVLFEGETLMLVTSVRNKKSVDMQNWAANNPEKNMPLESRIERPLSFFDKIALLMSVLVMLVVLIRLLCKKNGDNSGLPEIKGKASVDLLMKLMERIFLKPQGKVSILTSLVTVAIVSMQHGVPLMVTISLKYQMDKVVSNQVVDLHDLSSCATMGLVTVICVDASGGLMSKLMEVSRIRIGERDISNINDVTSEINQAVLDKLEQGVSVSVLAPEFILSPVSNSLISWAETTWDVNRESFGENLTILEHSRQNLRGDGNGVLVRKVGDHEEHLHSHWSGAASIILEICSHYYDSDGKCHGITNQKMKFGEVIKEMEDSGLEPIALAYQNTQAQVLQQDGLILVALIGLKPSFEETKKALAHLKNDGIKIKLVSSQDIAAVRALACELGIQVPDEDGVILEGKEIQDLNGTARSKKLDGALVMGGFLPHDKVLMIRCLQDEGHVVAFFGALTVSDAAVREAADIVIDAKSQNPRYDIESSNISVGGFSAITTIVRAGRCQYRNIQKFIQLQLTASSSGLFITLITTMCTGQSPLTTIELIWVNTIMCLLGGLMMLMNLDIKEDQHASQPNDRKQSLISQEVWRDIAIDVLCQSSVSLIFLFGGQVTDRTNQVRKTMIFNIFMLCQFFNQLYVLGLVKRGIFKMVLLRYCFLVALGVCLVMQILVIQYANGLADCMRLNATQWVICIVVSALSWLIEWLLKKFLTWIFNHFHPCTI 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2861 1002 Gene3D - 635 775 IPR023214 -
Alju08g2861 1002 Gene3D - 541 634 IPR023299 GO:0000166
Alju08g2861 1002 Gene3D - 277 461 - -
Alju08g2861 1002 PANTHER CATION TRANSPORTING ATPASE 99 988 - -
Alju08g2861 1002 SUPERFAMILY Calcium ATPase, transduction domain A 235 297 IPR008250 -
Alju08g2861 1002 SUPERFAMILY Calcium ATPase, transmembrane domain M 169 995 IPR023298 -
Alju08g2861 1002 MobiDBLite consensus disorder prediction 50 92 - -
Alju08g2861 1002 MobiDBLite consensus disorder prediction 50 82 - -
Alju08g2861 1002 Gene3D - 221 272 - -
Alju08g2861 1002 Gene3D - 776 992 - -
Alju08g2861 1002 Pfam Cation transporting ATPase, C-terminus 819 989 IPR006068 -
Alju08g2861 1002 Gene3D - 167 220 - -
Alju08g2861 1002 SUPERFAMILY HAD-like 602 837 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2861 Alju-ChrAlju08 53767216 53771526 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2861 7 987 Primary Pumps ATPases AT3G63380 31.401 7.60e-130 417