Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2854 ATGCAAGCATCAGAACATCATAGAAGTTCAAGTATGCACTATCAACTAATGCAACAAACTGAGGCGTACTGCTTACCTCAGTATCAAGCCTTAAATCATCAGCTATACGGCAACGACATTGGAAGCCAAGGAACCCACTTCTCTACTCCATGTTCTTCTGAACTCTATTGCACGTTGGAGTCCTCCTCTGCAACTGAAATTTTCAATGCCTATAACTCCCCTTCAACTGTGAGCTTCTCGCCCAATGGGAGCCCGATCTCACAGCAAGACTCTAAATCATTCTCATACCCACCTGATCAAAATCATTCTCCTGACAATACTTATAGCTCTCCAATGAGTGGGTCCTGTGTAACTGATGGTTTTCATAGTTTCCAGGACAAATTGAAAGAGCTGGAGAGTGTAATGTTCGGCCCGGACTCTGATAATCTTGATAGCTATGACAGCACCTTCAAGGAGGGAGTTAACTTTCATTGGCCTGAAATGGATGGCTGGAGGCAAACAATGGCAGCAATTTCTAGTAAGGACCTGACACAGGTTCTAGTCGAGTGTGCAAAAGCAGTTTCAGATAATGATTTGTTTATGGCTCAATGTTTGATGGATGAATTACGCCAAATGGTGTCAGTTTCCGGTGAACCGATTCAGAGGCTGGGAGCATATATTTTGGAAGGGCTTGTGGCTCGGTTGTCTGCCTCCGGGAGTTCAATCTACAAAGCTTTAAGATGTAAAGAACCGGCAAGCGCCGAGCTTCTCTCGTATATGCACATACTTTACGAGGTCTGCCCCTACTTCAAATTTGGTTACATGTCTGCAAATGGAGCCATTGCTGAAGCTATGAAAGATGAAGACAGAGTTCATATTATTGATTTCCAAATTGCTCAGGGAAGCCAATGGATTACTTTGATTCAGGCTTTTGCTGCTAGACCTGGGGGCCCACCCCACATCCGAATTACCGGCATTGATGATTCAACATCAGCTTATGCCCGTGGAGGAGGACTAAACATAGTGGGAAAGAGACTATCAAAGTTGGCTGAGAAATTCAAGGTGCCATTTGAATTTCATGCTGCAGCTATCTCTGGCTGTGATGTCCAGTTTCATAACCTCGTGGTCCGGCCAGGGGAGGCTCTGGCTGTGAATTTTGCATTCATGCTACATCACATGCCCGACGAAAGTGTCAGCACCGAGAATCACAGGGATCGGCTGCTGCGCTTGGTGAAGAGCTTGTCCCCAAAGGTGGTGACACTTGTTGAGCAAGAATCAAACACAAACACCGCGCCGTTCCTCCCTCGTTTCCTTGAAACTCTGGACTACTACAAAGCTATGTTTGTATCGATCGACGTGACTCTTCCCAGAGATCACAAAGAGCGAATCAACGTGGAGCAGCATTGCCTGGCGAGAGACGTTGTTAACATCATAGCTTGTGAAGGAGTCGAGAGGGTGGAACGGCATGAGGTGCTCGGCAAGTGGAGGGCCAGATTTGCAATGGCTGGTTTCACACCTTACCCTTTGAGCTCATTGGTGAACAGCACCATTAAGAAACTGCTTGAGAGTTATTCTGATAGATATACGCTTCAAGAAAGAGATGGGGCTCTCTATCTTGGTTGGATGAATAGAGATTTAGTTGCTTCTTGTGCATGGAAGTGA 1641 0.4601 MQASEHHRSSSMHYQLMQQTEAYCLPQYQALNHQLYGNDIGSQGTHFSTPCSSELYCTLESSSATEIFNAYNSPSTVSFSPNGSPISQQDSKSFSYPPDQNHSPDNTYSSPMSGSCVTDGFHSFQDKLKELESVMFGPDSDNLDSYDSTFKEGVNFHWPEMDGWRQTMAAISSKDLTQVLVECAKAVSDNDLFMAQCLMDELRQMVSVSGEPIQRLGAYILEGLVARLSASGSSIYKALRCKEPASAELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQIAQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLNIVGKRLSKLAEKFKVPFEFHAAAISGCDVQFHNLVVRPGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTAPFLPRFLETLDYYKAMFVSIDVTLPRDHKERINVEQHCLARDVVNIIACEGVERVERHEVLGKWRARFAMAGFTPYPLSSLVNSTIKKLLESYSDRYTLQERDGALYLGWMNRDLVASCAWK 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2854 546 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 133 540 IPR005202 -
Alju08g2854 546 Pfam GRAS domain family 176 546 IPR005202 -
Alju08g2854 546 ProSiteProfiles GRAS family profile. 167 546 IPR005202 -
Alju08g2854 546 MobiDBLite consensus disorder prediction 78 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2854 Alju-ChrAlju08 53657591 53659231 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2854 79 546 GRAS Transcription Factor Family AT5G48150 71.281 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju08g2854 GRAS 4.9e-137 CL0063