Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2805 ATGGAACAAACCAATGCCATGGATGGAGATTCCGGAATTTCGAAGTCGAATGTCCAGAATACGAATTTCACCTTCAGCACCCCTTCTGCTTCATCTTCGCGCCCGGTTTCGGGTCTGTCTAGGCCGAGATTGGTGAAGGTTCGAAAGCAGACTAATGCTCAGAGTTTGAGGTCGACGACAGGGATCGAGGAGCATCTACTGGCTCCTGGGTTCAATCCTTTTGCTTCCGTTGGCGACAACTTGGTTCGACCCTTTTCTGGGTCGGAGATGGCTTCATCGTCTACATTCAGTGAGATTGATGCTGGACAGGCTGGAAATGAGCCATTTGTCTTTGGAGCCAAGAGGGTTGATCCAGGATCGAATTTAAACAAGAACAACATGGGTTCGGGTGTGAATTTCGATCAAGGAATTGTTGATCAAATGAGAAATCTGAAAATGGGCAATGTGAATGATGTTTCAAACTTTAAAGATGGGGGTTATAAGAAGGGCGAGTATGCATTTCAGAGTGGTCATAAGAAGAGTTCCAGTCATGATGGAAGCTTGTTGTCTACGCTTCCAGAAGATATGAGGAAGTTGAATATTGGTGTTGGTGGAGTTGAACACATTGAGAAAACCGAAAGCAGATGTTCAAATACATATACAGATGGTTTTTCTCAATTCACGTCCCGAAGTATATCCAACCCAAGTGTTTCTTCCAGTGTTGAAATGGAACTCCAAAGTGAGTTGAACAAGAAATTGAGTATTAAAGAAAGCAGTTCTGGTGGTCTACATATTGATAACTCAACAAATGAACTTATCAACCAAATGAAGAATCTAAATGTGAAGGATTCTATGGGTTTTGATAGTGTTAAGAAGAATGAGGCTGATGTAACGACTGGCAGGAAAAAAAATTCTGCTTCTGCAAACAGTAAAACGACAACTAGTTATATTGGGGGAAGAACAGAGGCCAGTCTGTTGAGAGAAATGGAGAAATTAAAGTTATTCAGTGAGAAGGGGGACGTCACCGGCCCAAAATTTTGGAATCCTTCCTCTCAGGTACCTTTGGGGGAAACTAACCAAACAGATGCACGTAGTGGTCAGGTAGACAAACCCAAGGAAGGCATCAGAATGACAAAAAATGCCACGTCGTCATCATCATTCTTATCTGGAGGCATGAACTTTCCCATGGTTGGAAATGCTTCTGGAGTTACCAAGAGAGATGAATTTGTCTTCACAGGGAAGAAAGATGATTCAAACTCATCTTTTGTTGAGTTCAAAACACCAGGATTAGTGAAGGAGCAAAATAGCAACACAAGAGTGAAGAAAAGGAGAGGTAAACTGAAGCTGTCTACTCCTGTCCAGCTGTTTCATGGACAAGATTTTGTTTCAACGGAAAATGTTACTGAAGGAAACCCAGAGGATTCTGAGGCTTATTCACCTATGGAAGTGTCTCCATATCAGGAAACATTGGCTGAAACTCGGCGCTCAAGGGAGAATTCTGTGACGTCCAATGAGTCCTTGAGTCTTGATACCAACTCCACAGCTACTGATGTAGTGCAGACCAATTCTCATGATCGTATAGATGAAGATCGAATTGTGAAAACTGAACGCTTACTTATTGATGAATGTGATGCTGCATGCAAGGAAACAAATGATAAGGCTTCAGAGTACCACATTCCTGAAAATATTTTCAGTGAGGATCCACAAGATGGGTCTGCATCTGGGGTGGAAACTGAAAGCTTTAAGTCTGTAAATGATGAAGTGGACATAATTAGTGACGCGGGAAATGTATCAGTAGAAGCTGTGAGCAGTCCAAGCTCAAGTGTTGAAGCCAGTGGTGTTGTTAGTATGCCACATCTCAGTTGTGCTTGTTCAAATGATATAAGTGGGTTCCCCTTCACATTTTGTGCCTCGTACTCGGCTGAAGCTCAATCATCTAGTCCTAAGCGCAACCTGAAAAAGAAAAATTGGCTAAAAGTTGGTCACGATGCTCACAGCTTGACTCCAAGCTTGAAGATTTCTTATTCATCGTCATCAATGTCCTTTTCTTCATGCTCCCAAACATCTTCTCTTTTCACATCAGGGCAAGCTCAGAAAGACAAAGTATCAACTCCTCAACCTAAAAAAAGGGATTCTGAGATTAATAAGGAGCAGGGGATCAAGGAGGAGGCTGCTTCTAATGCTGCTGCAGACATTGCTGGTCAGGAAGCTAGTGAAAAGTGGCGGCACAGGGGAAACCAAGCCTATAAAAATGGGGATTTATCTATGGCTGAGGATTGTTACACTAAAGGACTTCAATGTATTTCTAAAGAAGCAACATCCAGGAGCTCTATGAGAGCTTTGATGCTTTGTTATAGCAATCGTGCTGCAACACGCATGTCTCTTGGAAGGATGAGAGATGCACTTAAAGATTGTATTCTTGCAGCTGAAATAGATCAAAATTTCCTCAGGGTACAACTTAGAGCTGCAAATTGTTACCTTGCTTTGGGGGAAGTTGAAGATGCATTGAAATATTTCAAGAGGTGCTTGCAAACTGGAGCTGGGGTTTGTGTAGATCGAAAAATTGCTGTGGAAGCCTCTGATGGCTTACAAAAGGCCCAGAAAGTATTAGAATTCATCAATCATTCTGTTGAACTTTTGCAAAGAAGGACGCCCTCTGACACGGATAGGTCATTGGAACAAATTAATGAGGCGTTGATGATTAGTTCATACTCTGAAAAATTACTTGAAATGAAAGCAGAAGCTCTTTTCATGTTGTGTAAATTTGAAGAGGTGATTCAGCTGTGTGACCAGACCCTTGGTTCTACTGAGAAGAATTTTTGTTCATTGGATGCTGATGGAGAAGTCATGAATTTGGATAACTCAAAACTCCCAAAAAGCTTCTGCTTCCGGCTATGGCGATGCTCAATGAAACTTAAATCCTACTTTCACCTCGGAAAGCTTGAAGAAGGCCTTTCCTCATTGGAGGAACAAGAAAAAGCGGTATCTTCTATGAACAAGAGTGGAAGCAATGTTTTTGAATCACTGATTCCACTGGCTGCCATTGTACGTGAACTATTACGTCACAAGACTGCAGGGAATGAAGCATTTCAGGCAGGAAGACATGCAGAAGCTGTTGAGCATTATACTGCAGCTTTGTCATGTAATGTGGAGTCTCGCCCTTTTGCAGCTGTCTGCTTCTGTAATCGTGCTGCTGCTTATACAGCATTAGGTCAAATTACTGATGCTATTGCAGATTGCTGTCTAGCTATAGCTCTGGATGGAAATTATTTGAAGGCACTTTCTAGGCGTGCAACTCTGTATGAGAAGATCAGAGATTATGCCCAAGCAGCTAGCGATCTTCAGAGGCTTGTCTCTATTCTCAATGAACGGGTGAATGATAAGGCCAATCAGCATGGAATATCTGATAGGTCTTATAATTATGTTAATGACTTGAAACAAAATTCTATTCGGCTTTCTGAAATGGAGGACGAAGCCAGAAAGGAGGTCCCTCTTGATATGTACCTCATATTGGGAGTTGAACCGTCTATTTCTACATCTGAAATCAAGAAGGCCTATCGGAAGGCTGCACTTAGACATCATCCCGACAAGGCTGGCCAATCTTTGGCACGAAGTGACAATGGTGATGATCAGATGTGGAAGGATATTGCTGAAGAAGTACGTCGAGATGCTGATAGGCTTTTCAAAATGATTGGAGAGGCCTATGCAGTATTGTCAGACCCTGCCAAGCGTGCACGATACGATGCCGAAGAAGAAATGAGAAATGCTCAAAAGAAGCGCAATGAAGGCAGCATGGCTAAAACTAATGTTGATACCCAATCTTCCCCATTTGAACCAAGCAACATGAGGAGACACTGGCGAGATTTACGGAGATCATATGGTAACTCATCTTCCAGAGGCTTTGAGACCAGCCAGTCGGGGAGATCATATGGTAGCTCATCCTTTAGGGGCTTTGAAACTGGCCAGTCAGGCAGGTACTAA 3960 0.4258 MEQTNAMDGDSGISKSNVQNTNFTFSTPSASSSRPVSGLSRPRLVKVRKQTNAQSLRSTTGIEEHLLAPGFNPFASVGDNLVRPFSGSEMASSSTFSEIDAGQAGNEPFVFGAKRVDPGSNLNKNNMGSGVNFDQGIVDQMRNLKMGNVNDVSNFKDGGYKKGEYAFQSGHKKSSSHDGSLLSTLPEDMRKLNIGVGGVEHIEKTESRCSNTYTDGFSQFTSRSISNPSVSSSVEMELQSELNKKLSIKESSSGGLHIDNSTNELINQMKNLNVKDSMGFDSVKKNEADVTTGRKKNSASANSKTTTSYIGGRTEASLLREMEKLKLFSEKGDVTGPKFWNPSSQVPLGETNQTDARSGQVDKPKEGIRMTKNATSSSSFLSGGMNFPMVGNASGVTKRDEFVFTGKKDDSNSSFVEFKTPGLVKEQNSNTRVKKRRGKLKLSTPVQLFHGQDFVSTENVTEGNPEDSEAYSPMEVSPYQETLAETRRSRENSVTSNESLSLDTNSTATDVVQTNSHDRIDEDRIVKTERLLIDECDAACKETNDKASEYHIPENIFSEDPQDGSASGVETESFKSVNDEVDIISDAGNVSVEAVSSPSSSVEASGVVSMPHLSCACSNDISGFPFTFCASYSAEAQSSSPKRNLKKKNWLKVGHDAHSLTPSLKISYSSSSMSFSSCSQTSSLFTSGQAQKDKVSTPQPKKRDSEINKEQGIKEEAASNAAADIAGQEASEKWRHRGNQAYKNGDLSMAEDCYTKGLQCISKEATSRSSMRALMLCYSNRAATRMSLGRMRDALKDCILAAEIDQNFLRVQLRAANCYLALGEVEDALKYFKRCLQTGAGVCVDRKIAVEASDGLQKAQKVLEFINHSVELLQRRTPSDTDRSLEQINEALMISSYSEKLLEMKAEALFMLCKFEEVIQLCDQTLGSTEKNFCSLDADGEVMNLDNSKLPKSFCFRLWRCSMKLKSYFHLGKLEEGLSSLEEQEKAVSSMNKSGSNVFESLIPLAAIVRELLRHKTAGNEAFQAGRHAEAVEHYTAALSCNVESRPFAAVCFCNRAAAYTALGQITDAIADCCLAIALDGNYLKALSRRATLYEKIRDYAQAASDLQRLVSILNERVNDKANQHGISDRSYNYVNDLKQNSIRLSEMEDEARKEVPLDMYLILGVEPSISTSEIKKAYRKAALRHHPDKAGQSLARSDNGDDQMWKDIAEEVRRDADRLFKMIGEAYAVLSDPAKRARYDAEEEMRNAQKKRNEGSMAKTNVDTQSSPFEPSNMRRHWRDLRRSYGNSSSRGFETSQSGRSYGSSSFRGFETGQSGRY 1319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2805 1319 Coils Coil 1235 1255 - -
Alju08g2805 1319 ProSitePatterns Nt-dnaJ domain signature. 1221 1240 IPR018253 -
Alju08g2805 1319 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 14 1292 - -
Alju08g2805 1319 MobiDBLite consensus disorder prediction 336 365 - -
Alju08g2805 1319 MobiDBLite consensus disorder prediction 338 358 - -
Alju08g2805 1319 SUPERFAMILY Chaperone J-domain 1117 1240 IPR036869 -
Alju08g2805 1319 CDD DnaJ 1159 1233 IPR001623 -
Alju08g2805 1319 Pfam Tetratricopeptide repeat 810 837 IPR019734 GO:0005515
Alju08g2805 1319 MobiDBLite consensus disorder prediction 696 713 - -
Alju08g2805 1319 Gene3D DnaJ domain 1145 1268 IPR036869 -
Alju08g2805 1319 SMART dnaj_3 1158 1236 IPR001623 -
Alju08g2805 1319 MobiDBLite consensus disorder prediction 1 38 - -
Alju08g2805 1319 MobiDBLite consensus disorder prediction 1 43 - -
Alju08g2805 1319 SMART tpr_5 899 932 IPR019734 GO:0005515
Alju08g2805 1319 SMART tpr_5 775 808 IPR019734 GO:0005515
Alju08g2805 1319 SMART tpr_5 731 764 IPR019734 GO:0005515
Alju08g2805 1319 SMART tpr_5 809 842 IPR019734 GO:0005515
Alju08g2805 1319 SMART tpr_5 1050 1083 IPR019734 GO:0005515
Alju08g2805 1319 SMART tpr_5 1012 1045 IPR019734 GO:0005515
Alju08g2805 1319 SMART tpr_5 1084 1117 IPR019734 GO:0005515
Alju08g2805 1319 MobiDBLite consensus disorder prediction 293 308 - -
Alju08g2805 1319 MobiDBLite consensus disorder prediction 1241 1258 - -
Alju08g2805 1319 Pfam DnaJ domain 1159 1241 IPR001623 -
Alju08g2805 1319 SUPERFAMILY TPR-like 731 926 IPR011990 GO:0005515
Alju08g2805 1319 Coils Coil 1135 1155 - -
Alju08g2805 1319 MobiDBLite consensus disorder prediction 1259 1273 - -
Alju08g2805 1319 MobiDBLite consensus disorder prediction 1286 1319 - -
Alju08g2805 1319 Coils Coil 856 876 - -
Alju08g2805 1319 SUPERFAMILY TPR-like 1015 1114 IPR011990 GO:0005515
Alju08g2805 1319 Gene3D Tetratricopeptide repeat domain 1011 1135 IPR011990 GO:0005515
Alju08g2805 1319 MobiDBLite consensus disorder prediction 286 308 - -
Alju08g2805 1319 MobiDBLite consensus disorder prediction 456 502 - -
Alju08g2805 1319 Gene3D Tetratricopeptide repeat domain 730 1001 IPR011990 GO:0005515
Alju08g2805 1319 PRINTS DnaJ domain signature 1216 1236 IPR001623 -
Alju08g2805 1319 PRINTS DnaJ domain signature 1179 1194 IPR001623 -
Alju08g2805 1319 PRINTS DnaJ domain signature 1161 1179 IPR001623 -
Alju08g2805 1319 MobiDBLite consensus disorder prediction 1241 1319 - -
Alju08g2805 1319 ProSiteProfiles dnaJ domain profile. 1159 1244 IPR001623 -
Alju08g2805 1319 MobiDBLite consensus disorder prediction 688 736 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2805 Alju-ChrAlju08 51194869 51210693 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2805 1161 1242 C2H2 Transcription Factor Family AT1G74250 34.146 5.48e-06 48.9