Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2798 ATGCATGGCGAAATTGGATTTGAGAGCACGCCAAAGATTGGATCTACTTTCACATTTACAGCTGTCTTTACCATTGAATCCCCTAGTTCAACTGAGGGTAAAACCCAGCAAATTAACAACCAACCTAACCATGCATCCTCAGAATTTCAGGGCATGACTGCACTTGTTATAGACCCTAGACCTGTCAGAGCTAAAGTGTTGAGATATCACATTAAACGGCTTGGCATTCATGTTGAAATAGCTTCAGACTTAAATCAAGGTTTGTCTGTCATAAGCAATGGGGATATAGTTATTAATGTGATCCTAGTTGAACATGAAGTCTGGGATAGAGATTCTGGTGTTTCATCTCATTTTATCAATAACATGAGGAAAATTGATCTCGGGGTTCCTCCAAAGCTGTTCGTTGTTGTTAATTCTAGTAGCTCTTCCAGAGCAAGTTCCATAACATTGGGTGTTCATAATCCAACTGTCATTGTAAAACCTCTGAGAGCAAGCATACTTGCTGCTACACTGCAGAGAGCCATGGGTTTTGGGAACAAGGGGAATCCTCGAAATGGGGAGCTTCCAAGTTTGTCTCTCCGCCACCTTTTGCATGGGAGGAAAATCCTTATTGTAGATGACAATAGTGTGAACCGAACAGTTGCAGCTGGAGCTTTAAAAAAGTATGGAGCTGATGTGGTCTGTGTTAACAGTGGAAAAGATGCCATCTCTACGCTGAAGCCGCCCCATCAATTTGATGCCTGTTTTATGGATATTCAAATGCCAGAAATGGATGGGTTTGAAGCTACTAGGAGGATTCGGGACATGGAATGCCATGTAAACAAAGGAGAAGTGCCTGTGGAAACCTTGGAGAAGACTTCAAACTGGAGTATACCCATTTTGGCTATGACTGCAGATGTGATTCAGGCAACGTATGAGGAATGCCTGAAGTGTGGAATGGATGGATATGTTTCAAAACCATTTGAAGCTGAACAGCTTTATCAGGAAGTTTCGCGGTTTTTCCAATCAACTTCATGA 1017 0.4208 MHGEIGFESTPKIGSTFTFTAVFTIESPSSTEGKTQQINNQPNHASSEFQGMTALVIDPRPVRAKVLRYHIKRLGIHVEIASDLNQGLSVISNGDIVINVILVEHEVWDRDSGVSSHFINNMRKIDLGVPPKLFVVVNSSSSSRASSITLGVHNPTVIVKPLRASILAATLQRAMGFGNKGNPRNGELPSLSLRHLLHGRKILIVDDNSVNRTVAAGALKKYGADVVCVNSGKDAISTLKPPHQFDACFMDIQMPEMDGFEATRRIRDMECHVNKGEVPVETLEKTSNWSIPILAMTADVIQATYEECLKCGMDGYVSKPFEAEQLYQEVSRFFQSTS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2798 338 Gene3D - 195 337 - -
Alju08g2798 338 Pfam Response regulator receiver domain 202 330 IPR001789 GO:0000160
Alju08g2798 338 CDD PRTases_typeI 154 229 IPR000836 -
Alju08g2798 338 SUPERFAMILY CheY-like 48 176 IPR011006 -
Alju08g2798 338 ProSiteProfiles Response regulatory domain profile. 53 175 IPR001789 GO:0000160
Alju08g2798 338 Gene3D - 40 176 - -
Alju08g2798 338 CDD REC_hyHK_CKI1_RcsC-like 202 330 - -
Alju08g2798 338 SMART REC_2 200 330 IPR001789 GO:0000160
Alju08g2798 338 SUPERFAMILY CheY-like 198 334 IPR011006 -
Alju08g2798 338 ProSiteProfiles Response regulatory domain profile. 201 334 IPR001789 GO:0000160
Alju08g2798 338 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2798 Alju-ChrAlju08 50778466 50779765 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2798 1 338 Miscellaneous Gene Families AT1G27320 61.224 3.69e-132 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju08g2798 Response_reg 5.9e-22 CL0304