Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2796 ATGTTGCATATGCTTATGGACTCGGATCTAGATGTAACACAGAGAAAATATGTCAGAACAACACATGGTTGTGGAAAAGCTCTAGTGTCGCTTATAAATGAGGTTTTGGACCAAGCAAAGATTGAAGCTGGTAAGCTTGAGCTTGAGGCAGTGCTATTTGACATCCGAGCAGTTTTGGATGATGTGTTGTCACTATTCTCTGAGAAATCTAAAGAGAAAGGGTTGGCAGTGTATATCTCAGATAAGGTTCCTGAACAGCTAGTGGGTGATCCAAGAAGGTTTCGACAAATAATTACAAATCTTATGGGCAATTCAATTAAGTTCACAGACAAATGGAACATATTTGTCACTGTCCATCTTGTTGAGGAAGTTGTCAATTCAATTGAAGTTGCAACATCAAAGAATACCTTGAGTGGCTTTCCTGTTGCTGATAGATGTAAAAGCTGGAAAGGATTCAGTTTTCTCAGTCAAGATGGACCTTTGGGTTCTTTCTCTTCTTCCTCCCCTGATCGCATTACTCTTATTGTTTCTGTAGAAGATACATGCGAAGGAATTCCTGAAGAAGCCGAACCACACATCTTCACTCCATTCATACAGAACACGCCAAAAATCGGATCTACTTTCACATTTACAGCTGTCTTTACCATTAAATCCCCTAGTTCATCTGAGGGTAAAACCCAGCAAATTAACAACCAAGCTAACCATGCATCCTTAGAATTTCAGTGCATGACTGTACTTGTTATAGACCCTAGACCTGTCAGAGCTAAAGTTTTGAGATATCACATTAAACGGCTTGGCATTCATGTTGAAATAGCTTCAAACTTAAATCATGTCTGGGATAGAGATTCTGGTGTTTCATCTTATTTTATCAATAACATGAGGAAAATTGATCTCGGGGTTCCTCCAAAGCTGTTCGTTGTTGTTAATTCTAGTAGCTCTTCCAGATCAAGTTCCATACCATTGGGTGTTCATAATCCAACTGTCATTGTAAAACCTCTGAGAGCAAGCATACTTGCTGCTACACTGCAGAGAGCCATGGGTGTTGAGAATAAGGGGAATCCTCGAAATGGGGAGCTTCCAAGTTTGTCTCTCCGCCACCTTTTTCATGGGAGGAAAATCATTATTGTAGATGACAATAGTGTGAACCGAACAGTTGCAGCTGGAGCTTTAAAAAAGTATGGAGCTGATGTGGTCTGTGTTAACAGTGGAAAAGATGCCATCTCTACGCTGAAGCCGCCCCATCAATTTGATGCCTGTTTTATGGATATTCAAATGCCAGAAATGGATGGGTTTGAAGCTACTAGGAGGATTCGGGACATGGAATACCATGTAAACAAAGGAGAAGTGCCTGTGGAAACCTTGGAGAATACTTCAAACTGGCATGTACCCATTTTGGCTATGACTGCAGATGTGATTCAGGCAACGCATGAGGAATGCCTGAAGTGTGGAATGAGGAATGCCTGA 1464 0.4105 MLHMLMDSDLDVTQRKYVRTTHGCGKALVSLINEVLDQAKIEAGKLELEAVLFDIRAVLDDVLSLFSEKSKEKGLAVYISDKVPEQLVGDPRRFRQIITNLMGNSIKFTDKWNIFVTVHLVEEVVNSIEVATSKNTLSGFPVADRCKSWKGFSFLSQDGPLGSFSSSSPDRITLIVSVEDTCEGIPEEAEPHIFTPFIQNTPKIGSTFTFTAVFTIKSPSSSEGKTQQINNQANHASLEFQCMTVLVIDPRPVRAKVLRYHIKRLGIHVEIASNLNHVWDRDSGVSSYFINNMRKIDLGVPPKLFVVVNSSSSSRSSSIPLGVHNPTVIVKPLRASILAATLQRAMGVENKGNPRNGELPSLSLRHLFHGRKIIIVDDNSVNRTVAAGALKKYGADVVCVNSGKDAISTLKPPHQFDACFMDIQMPEMDGFEATRRIRDMEYHVNKGEVPVETLENTSNWHVPILAMTADVIQATHEECLKCGMRNA 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2796 487 Gene3D - 45 213 IPR036890 -
Alju08g2796 487 Gene3D - 1 44 - -
Alju08g2796 487 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 89 202 IPR003594 -
Alju08g2796 487 ProSiteProfiles Histidine kinase domain profile. 1 205 IPR005467 -
Alju08g2796 487 SMART REC_2 371 485 IPR001789 GO:0000160
Alju08g2796 487 Pfam Response regulator receiver domain 373 484 IPR001789 GO:0000160
Alju08g2796 487 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 484 - -
Alju08g2796 487 CDD PRTases_typeI 325 400 IPR000836 -
Alju08g2796 487 SUPERFAMILY CheY-like 368 485 IPR011006 -
Alju08g2796 487 SUPERFAMILY CheY-like 240 347 IPR011006 -
Alju08g2796 487 CDD REC_hyHK_CKI1_RcsC-like 373 484 - -
Alju08g2796 487 Gene3D - 366 487 - -
Alju08g2796 487 SMART HKATPase_4 89 222 IPR003594 -
Alju08g2796 487 ProSiteProfiles Response regulatory domain profile. 372 487 IPR001789 GO:0000160
Alju08g2796 487 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33 205 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2796 Alju-ChrAlju08 50682188 50684418 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2796 1 484 Miscellaneous Gene Families AT1G27320 55.495 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju08g2796 Response_reg 4.3e-15 CL0304