Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2768 ATGGATCTTCTTCAGAACTACTCATATCAGAATGATGATGGTTCAGCCAAATCTGATAACCATGATCAACAAAACCCTAATTCTTCCCTAGAATCCTCCCCACCCCGCCTTCTTCCTGCCAAATCTGCCGCCGCCAAGGTCAATGACACTATGCTTGCCCTCACTGTTGGTGAAGCCAATCGAATTGAACCCTTTCAAAGCCCATCGATCCCACTCAGCATGTCATCCTCTTTAACCCCACCTACAACCAGCTATGGGCACCTCTTCATGGCCCTGCACATCCGTACGCCAAGGACGGCATTGCCTAAGTTTAGCTATGCTGCCGACCCGTCAGCCTCTGCTGGATATAGTTATGTTGGGGACTTGGAGTCACTACACAAGAATGATGGGGTTTCAGTTTACAACATACCGCAGCATGAACAGAAGAGGAGGAAGCTTGAAAAGAAAAAAGAATCAGCAGACAATGAGGATGCAGGGGGAGATGATGTTGACATGGCTGATGTTGCTAACCCAGCCACTGATATGTGGTTACTGAAGAATAAGAAGAGCCCATGGGCGGGTAAAAAAGAAGGGTTGCAAACTGAATTAACTGAGGAGCAGAAGAAATATGCAGAAGAGTATGCCAAGAAGAAAGGAGTAGAAAAGAGTGGATTTGGAGGGTGTATCTGCTATTCGGTTCTTCCCCAACTACGGGCATTTGATTCTGTCAGCAAGTATGGATACAAAGGTGAAGATTTGGGATGTGTGCAATTCTGTATTGGGGATACGGAGACTGGTCAAGTGATATCAACTTTCTCAACTGGGAAAATCCCTTATGTGGTCAAGCTCAATGCTGATGAAGATAAGCAGAATGTTTTGTTAGCTGGCATGAGTGATAAAAAGATTGTTCAGTGGGATATGAATACTGGGCAAATAACACAAGAGTATGATCAGCATTTAGGGGCTGTGAATAGCATCACATTTGTCGACAACAACGGGAGATTTGTTACTTCCAGTGATGACAAGTCTTTCCGAGTATGGGAACTTGGTATTCCTGTGGTTATTAAGTACATTAGCGAACTACACATGCACTCTATTCCATCCATTTCCCTTCATCCTAACTCCAATTGGTTTGCTGCACAAAGCTTGGATAATCAGATCCTTATCTATAGTACTGGGGAGAAGTTCCAGCTTAACAAGAAAAAGAGGGTAAGTGTTGGTTCTGGGATTAGAAGAGTTGCAAAGTATTCAGGACTCTCAAGTGTCATGAAGGTGTTTGGATTGGATGTCTGTGGCATCCGTTGGAACAAAGCAAGGAAGCAACATGTGGCTGGGATGGATTGA 1323 0.4437 MDLLQNYSYQNDDGSAKSDNHDQQNPNSSLESSPPRLLPAKSAAAKVNDTMLALTVGEANRIEPFQSPSIPLSMSSSLTPPTTSYGHLFMALHIRTPRTALPKFSYAADPSASAGYSYVGDLESLHKNDGVSVYNIPQHEQKRRKLEKKKESADNEDAGGDDVDMADVANPATDMWLLKNKKSPWAGKKEGLQTELTEEQKKYAEEYAKKKGVEKSGFGGCICYSVLPQLRAFDSVSKYGYKGEDLGCVQFCIGDTETGQVISTFSTGKIPYVVKLNADEDKQNVLLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNSITFVDNNGRFVTSSDDKSFRVWELGIPVVIKYISELHMHSIPSISLHPNSNWFAAQSLDNQILIYSTGEKFQLNKKKRVSVGSGIRRVAKYSGLSSVMKVFGLDVCGIRWNKARKQHVAGMD 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2768 440 MobiDBLite consensus disorder prediction 1 37 - -
Alju08g2768 440 ProSiteProfiles Trp-Asp (WD) repeats profile. 309 342 IPR001680 GO:0005515
Alju08g2768 440 Gene3D - 251 432 IPR015943 GO:0005515
Alju08g2768 440 PANTHER PRE-MRNA-PROCESSING FACTOR 17 1 214 IPR032847 GO:0000398|GO:0071013
Alju08g2768 440 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 309 342 - -
Alju08g2768 440 MobiDBLite consensus disorder prediction 135 165 - -
Alju08g2768 440 Coils Coil 136 156 - -
Alju08g2768 440 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 252 386 IPR011047 -
Alju08g2768 440 Pfam WD domain, G-beta repeat 303 340 IPR001680 GO:0005515
Alju08g2768 440 SMART WD40_4 302 341 IPR001680 GO:0005515
Alju08g2768 440 SMART WD40_4 258 299 IPR001680 GO:0005515
Alju08g2768 440 SMART WD40_4 345 384 IPR001680 GO:0005515
Alju08g2768 440 MobiDBLite consensus disorder prediction 138 156 - -
Alju08g2768 440 Coils Coil 189 209 - -
Alju08g2768 440 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2768 Alju-ChrAlju08 50150864 50152625 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2768 283 383 U-box Gene Family AT2G33340 27.619 1.25e-06 48.9