Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2736 ATGTGCTTGTCCGATTTCAAAGACAATGGATCAGGTCATGTTTTTCCCAAATGCAACCACACTTTTCAAGTTGAATGCATCAACTTGTGGTTCAAGTCCCACTCAACTTGCCCGTTTTGTAGATCTTTGGTTGATCCTGTCATCCTGCTTGGGGATCGATCCAGACTGGAAGTGGTGATTGATGTGTGCGAACCGAGTTCGAGTTCAAGGAGTCATCAAGTTGCAGGAGAAGAGGACCGAAGTGGTCATACGCTCTGTTCTTCATCAACTTCGATTTCGTTAGATCCACAACCAGAAAAGTTGAAAGAATTTATTATTGATATGCATAAAGAAAGTCAATGGCGTTCAATTGACTATATGGTGCCGTTTCTTGCTTGTTCATTCAACACCATGATAGAAACAAGGCTTAAGGCGAACTTCCCAGCCCTTCCCAAAATTTGTTCCATTACATTAGACAGATCCCTTTTGGCAGACCTCTTGCTATCCTCAATGATCATAGACCACTCTTCAAGGGTTTTTGAGTCTGCTGATTCATTGCTTTCCCTTATACTATTCTCCCACCTACTACCATTTGCAACGAGGGCCTTGCGGATATAG 597 0.4271 MCLSDFKDNGSGHVFPKCNHTFQVECINLWFKSHSTCPFCRSLVDPVILLGDRSRLEVVIDVCEPSSSSRSHQVAGEEDRSGHTLCSSSTSISLDPQPEKLKEFIIDMHKESQWRSIDYMVPFLACSFNTMIETRLKANFPALPKICSITLDRSLLADLLLSSMIIDHSSRVFESADSLLSLILFSHLLPFATRALRI 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2736 198 SUPERFAMILY RING/U-box 2 47 - -
Alju08g2736 198 Pfam Ring finger domain 2 41 IPR001841 -
Alju08g2736 198 MobiDBLite consensus disorder prediction 68 91 - -
Alju08g2736 198 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 44 IPR044675 -
Alju08g2736 198 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 102 IPR013083 -
Alju08g2736 198 ProSiteProfiles Zinc finger RING-type profile. 1 41 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2736 Alju-ChrAlju08 49068959 49070046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2736 1 116 Rapid Response to Elicitors AT4G15975 36.207 2.54e-20 83.6