Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2735 ATGCCGAAGAATAAGGGAAAGGGAGGGAAGAACAGAAAGAGGGGAAAGAACGAAGGCGACGATGAGAAGAGAGAGCTTGTCTTCAAAGAAGACGGCCAAGAGTACGCTCAGGTTCTCCGTATCCTCGGCAACGGCCGATGCGAGGCCATGTGTATGGACGGCACCAAGAGGCTCTGCCATATCCGTGGCAAGATGCACAAGAAAGTCTGGATTTCTGCCGGCGATATAATCCTCGTCGGCCTCCGGGATTACCAGGACGACAAGGCCGATGTGATCCTCAGGTACTGGGCCTATGAGGCTAGGCTGTTGAAGGCTTATGGAGAGTTGCGCGACAACACCATAGTCAACGCGGGTATTGGAGATGGATTGGATGAGGAGGATGACGGCACTAGCAACGATTATGTCGAGTTTGGCTTTACTCCTCTTCTAATTGGCCCCTCCCATATTTCTTCCCTTTAA 459 0.5207 MPKNKGKGGKNRKRGKNEGDDEKRELVFKEDGQEYAQVLRILGNGRCEAMCMDGTKRLCHIRGKMHKKVWISAGDIILVGLRDYQDDKADVILRYWAYEARLLKAYGELRDNTIVNAGIGDGLDEEDDGTSNDYVEFGFTPLLIGPSHISSL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2735 152 SUPERFAMILY Nucleic acid-binding proteins 2 127 IPR012340 -
Alju08g2735 152 CDD S1_IF1A 33 109 IPR001253 GO:0003743|GO:0006413
Alju08g2735 152 SMART eIF1neu4 28 110 IPR001253 GO:0003743|GO:0006413
Alju08g2735 152 NCBIfam translation initiation factor eIF-1A 14 110 IPR001253 GO:0003743|GO:0006413
Alju08g2735 152 ProSiteProfiles S1 domain IF1 type profile. 22 96 IPR006196 GO:0003723|GO:0003743|GO:0006413
Alju08g2735 152 PANTHER EIF-1A 1 129 IPR001253 GO:0003743|GO:0006413
Alju08g2735 152 Hamap Translation initiation factor 1A [eif1a]. 16 110 IPR001253 GO:0003743|GO:0006413
Alju08g2735 152 Pfam Translation initiation factor 1A / IF-1 32 94 IPR006196 GO:0003723|GO:0003743|GO:0006413
Alju08g2735 152 Gene3D - 2 138 IPR012340 -
Alju08g2735 152 ProSitePatterns Eukaryotic initiation factor 1A signature. 41 63 IPR018104 GO:0003743|GO:0006413
Alju08g2735 152 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2735 Alju-ChrAlju08 49066459 49066917 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2735 1 137 Eukaryotic Initiation Factors Gene Family AT2G04520 81.752 1.18e-75 220