Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2734 ATGGGTTATATATGTGATTTCTGTGGAGAACAGAGGTCCATGGTGTATTGCCGGTCCGATGCTGCATGCTTGTGTTTGTCGTGTGATCGAAATGTTCATTCTGCAAATGCCCTTTCAAGACGTCATTCAAGGGCACTAATATGTGAGAGGTGCAATTCACAACCTGCTCTTGTAAGGTGTACTGAAGAGAGGATTTCGCTATGTCAGAATTGTGATTGGTTGGGCCACAGTACTTGCACATCTTTGTCAACACATAAGAGGCAAACAATCAATTGCTATTCTGGATGCCCTTCAGCCGCAGAACTTTCTTCAATATGGTCATTTGTCTTGGACATTCCAACTATTGGTGAATCTTCATGTGAGCAAGAACTAGGAATGATGAGTATTAATGAGAACAGCAACAAGAGTGGTTGGTTTCCCCCTGAAAGTCAGAATGCGTCTGGTTCAGCTCAAGTAATTGATGGACACAGCATGGATAAGTCTTGTGTCGGGCTATCTTTGATGCCCAAGTCGAGCTCAGAGCCTTGTACTCTAGACCACCCAACTGGACCTGCCAATCAAAGTCTATCCAAGCTATACTGCCCTGGTACAAAAGGTTCTGAACTATATGAAGATGATAACCTGTATGGTGACTTTGACATGGATGAATTGGATCTGAATCTTGAGAACTATGAGGAACTTTTTGGTGTGGCTCTTGGTCATTCTGAAGAGCTTTTGGAAAATGGCGGGATTGATAGTTTGTTCGGGACAAAGGAAACGTCTGCCGGTGATTCCAATCATCAGGCTGCTGCTGAGGGATCTTCAGTTGGACTGGTCAACACACCGCATCCAGCATGCAGCAATGCAGCATCTGCAGATTCCATGCCAAGCACGAAAACTGAACCGATTCTCTGTTTCACGGGAAAGCAAGCTCAATCAAATCTTTCATTTTCTGGTGTTACCGGAGAGAGTAGCGGTGCTGACTATCAAGATTGCGGTGCTTCTTCAATGCTTCTCACGGGGGAGCCTCCTTGGTGCCCTCCATGCCCTGAGAGTTCCTTGAAGAGTTCCAACCGCAGTGACGCCGTCATGCGTTACAAAGAAAAGAAGAAGGCACGCAAGTTTGAAAAAAGAGTGAGGTATGCCTCTCGCAAGGCAAGGGCTGATGTTCGAAGGCGTGTGAAGGGCCGATTTGTTAAAGCCGGTGAAGCCTATGATTACGATCCTTTGAGTCAAACCAGAAGCTGCTGA 1230 0.4602 MGYICDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRALICERCNSQPALVRCTEERISLCQNCDWLGHSTCTSLSTHKRQTINCYSGCPSAAELSSIWSFVLDIPTIGESSCEQELGMMSINENSNKSGWFPPESQNASGSAQVIDGHSMDKSCVGLSLMPKSSSEPCTLDHPTGPANQSLSKLYCPGTKGSELYEDDNLYGDFDMDELDLNLENYEELFGVALGHSEELLENGGIDSLFGTKETSAGDSNHQAAAEGSSVGLVNTPHPACSNAASADSMPSTKTEPILCFTGKQAQSNLSFSGVTGESSGADYQDCGASSMLLTGEPPWCPPCPESSLKSSNRSDAVMRYKEKKKARKFEKRVRYASRKARADVRRRVKGRFVKAGEAYDYDPLSQTRSC 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2734 409 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 397 - -
Alju08g2734 409 ProSiteProfiles CCT domain profile. 352 394 IPR010402 GO:0005515
Alju08g2734 409 CDD Bbox1_BBX-like 47 90 - -
Alju08g2734 409 SMART bboxneu5 48 90 IPR000315 GO:0008270
Alju08g2734 409 SMART bboxneu5 4 47 IPR000315 GO:0008270
Alju08g2734 409 CDD Bbox1_BBX-like 4 47 - -
Alju08g2734 409 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Alju08g2734 409 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Alju08g2734 409 Pfam CCT motif 352 394 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2734 Alju-ChrAlju08 48932508 48936376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2734 1 408 C2C2-CO-like Transcription Factor Family AT3G07650 57.683 1.90e-154 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Alju08g2734 CCT 1.8e-15 CL0281