Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2697 ATGCTCAATCATGCTGCGGCAACATCCACAGGGGAGCCACCGACGAGAAAGACAAAAGCAGATTCTGCTTCTTGTGTGATAGACATGAACAAGAAGGAGTTGGCATCTGAAGCGAGTATTATTGATGGGTATCTCTTGTTCAAAATTGAGATTGTAGTCATGGCATCTCCTCATATTCCAAATTTTGAAGACCTTCATGAATATAGTTTTAATATGAGATTCATTGTTGAGGCACATGTGAATTCACCTCATCCAGAAAATTTGGATATATTAATCTTTGAAGTGTTTCAATCTCCTTACATTATACCTTGCGCCACAATACTCCAAGATGTTCCAGAATTTCTTCGTACAACTGTATCAAACTATCTTTCCGAAAGAGACACACATACTTTGGCATCAGAAATCATATCTTACTATCAAGAGACTACAGTTGAAACTACTGGTCCTCGCATAATACCATTAGAAGTGCATTTTTATACTGATTATGCTTTTGGTCAGTATGCACCATTACTTTATGTCCTTCAACATTACGAAGGTCATCGCAACATGATATATTTGGAGCTGACAGAAATGCATGAAGCCATAAATCAATCAATGCAACAAATTTCTCTGGTTCCAGCATCAAAAGAAGCTATTGCATCGCTCAAGAAAACAAAAACGCTAGATGAAAATATAAATCTAGACCGATGCAGTATTTGCTTAGAAGATTTTGATGATGATGCCGAAGTTTCAGCAATGCCTTGTGACCATACATTTGTTAACATTCATTCTCCGCTAATGTTGGAGAAATAG 792 0.3712 MLNHAAATSTGEPPTRKTKADSASCVIDMNKKELASEASIIDGYLLFKIEIVVMASPHIPNFEDLHEYSFNMRFIVEAHVNSPHPENLDILIFEVFQSPYIIPCATILQDVPEFLRTTVSNYLSERDTHTLASEIISYYQETTVETTGPRIIPLEVHFYTDYAFGQYAPLLYVLQHYEGHRNMIYLELTEMHEAINQSMQQISLVPASKEAIASLKKTKTLDENINLDRCSICLEDFDDDAEVSAMPCDHTFVNIHSPLMLEK 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2697 263 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 191 256 IPR013083 -
Alju08g2697 263 SUPERFAMILY RING/U-box 229 252 - -
Alju08g2697 263 MobiDBLite consensus disorder prediction 1 17 - -
Alju08g2697 263 MobiDBLite consensus disorder prediction 1 22 - -
Alju08g2697 263 Pfam RING-like zinc finger 230 252 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2697 Alju-ChrAlju08 47297857 47301327 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2697 190 252 C3H Transcription Factor Family AT1G18760 36.364 1.11e-07 49.7