Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2661 ATGGGACGCTCACGCGCTGCTGTGCGCCAGCCTGACGATGACCCCATCCAAAGATCCAAGAGGAAAAAGGTAGCTTTGAATTCAGAAATTCTAAGTATAGGCCATGGAATAAATGAGGGGAAAGCATCTCTTTATCACTGTAATTATTGCAACAAAGATATTTCCAGGATGATCCGCATCAAGTGTGCTGTTTGTCAAGATTTTGATCTCTGCATAGAGTGCTTCTCGGTTGGAGCTGAGGTGACAACTCATAAAAGCAATCATCCGTATAGGGTTATGGATAATCTATCTTTTCCGTTGCTATGTCCAGACTGGAATGCAGATGAAGAGATGATGCTTCTAGATGGTATTGCAATGTATGGATTTGGAAATTGGACTGAAGTAGCAGGATGTGTTGGAACAAAAAGCAAGTCTGAATGTATTGATCACTATAATGCTTTTTACATGAATTCACCAAGCTTTCCTCTCCCTGATTTGTCTCATGTTATGGGAAAAAGCAGGGAGGAGCTTCTTGCCATGGCCAAAGAGTTTGGTGATGTTAAGAAAGAACTTTCTCCAAATGCAGAGCTTACACTGAAAGAAGAGCCTCACTTTTCTGCTGGAATAAACTCAGAGGAATCTAAAAAGGAAGAACCTGCTAATCAAACACTGTCTAGCTTAACTTCAGGTGCTAATATGGGCACAGTTCCTACCAAAGCTTATTCAAGTTCTTTTAAGAAGGCTTCCAATGCTAACCCGATTAACAAGAGACTTAAAATGGAAGTGGAGACTCAAGCAGAGCGAAGCATTGGAGAGAAAAAACCCAAGTTATCTGGGGAAGATGGGCCTTCTGTGATGGAGTTGAGTGGATACAATTTTAAGAGAGAAGAATTTGAGATTGAATATGACAATGATGCAGAACAAGTGTTAGCAGATATGGAATTTAAAGACACTGATACTGAATCTGAACGTTTATTGAAACTACGAGTGCTCCAAATATACTCAAAAAGGTTAGATGAAAGAAAGCGGAGAAAGGATTTTATCCTTGAAAGAAATTTGCTTTATGCTGACCCCTTTGAGAAATCTCTTACACCTGAAGAGAAACAAATATGTCAACGCTATAGGGTCTTCATGAGGTTTCATTCTGAAGAAGAGCACAAGGAGTTTCTCAAAAGTATTATTGAAGAACATCGTATTGTTAAGAGAATAAAAGATCTCCAGGAAGCTCGAGCTGCTGGTTGTCGACTGTCTGCCAATGCATATAGATTTATTGATCTCAAAAGGGCAGCTGAACAAAGTGCCCCTGCCGCGTTACACACATTCTCAAGGTCCCTAGATCATTGGGATGTCTCTGGAATTACGGGGGCTGAGTTACTATCACAATCTGAGAAGGAGCTCTGTGATGAGATAAGAATTCTACCGTCACACTATCTCAACATGTTACAGATCATGACACAGGAAATTTCTAGGGGTAGTGTGACCAAGAAATCTGATGCATATATCTTGTTCAATGTAGAACCCAGCAAGGTTGATAGAGTTTATGATACGCTTGTGAAGAAAGGGATTGCTTCAACTTGA 1557 0.4033 MGRSRAAVRQPDDDPIQRSKRKKVALNSEILSIGHGINEGKASLYHCNYCNKDISRMIRIKCAVCQDFDLCIECFSVGAEVTTHKSNHPYRVMDNLSFPLLCPDWNADEEMMLLDGIAMYGFGNWTEVAGCVGTKSKSECIDHYNAFYMNSPSFPLPDLSHVMGKSREELLAMAKEFGDVKKELSPNAELTLKEEPHFSAGINSEESKKEEPANQTLSSLTSGANMGTVPTKAYSSSFKKASNANPINKRLKMEVETQAERSIGEKKPKLSGEDGPSVMELSGYNFKREEFEIEYDNDAEQVLADMEFKDTDTESERLLKLRVLQIYSKRLDERKRRKDFILERNLLYADPFEKSLTPEEKQICQRYRVFMRFHSEEEHKEFLKSIIEEHRIVKRIKDLQEARAAGCRLSANAYRFIDLKRAAEQSAPAALHTFSRSLDHWDVSGITGAELLSQSEKELCDEIRILPSHYLNMLQIMTQEISRGSVTKKSDAYILFNVEPSKVDRVYDTLVKKGIAST 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2661 518 Pfam Myb-like DNA-binding domain 104 145 IPR001005 -
Alju08g2661 518 SUPERFAMILY Homeodomain-like 433 515 IPR009057 -
Alju08g2661 518 SUPERFAMILY Homeodomain-like 98 151 IPR009057 -
Alju08g2661 518 CDD SANT 105 145 IPR001005 -
Alju08g2661 518 FunFam Transcriptional adapter 38 93 - -
Alju08g2661 518 ProSiteProfiles Myb-like domain profile. 105 148 IPR001005 -
Alju08g2661 518 FunFam Transcriptional adapter 2 433 517 - -
Alju08g2661 518 ProSiteProfiles SWIRM domain profile. 432 518 IPR007526 GO:0005515
Alju08g2661 518 SMART sant 101 150 IPR001005 -
Alju08g2661 518 SUPERFAMILY RING/U-box 45 108 - -
Alju08g2661 518 Gene3D - 433 517 IPR036388 -
Alju08g2661 518 MobiDBLite consensus disorder prediction 195 237 - -
Alju08g2661 518 FunFam Transcriptional adapter 2 98 150 - -
Alju08g2661 518 CDD ZZ_ADA2 45 93 IPR041983 -
Alju08g2661 518 ProSiteProfiles Zinc finger ZZ-type profile. 42 98 IPR000433 GO:0008270
Alju08g2661 518 ProSitePatterns Zinc finger ZZ-type signature. 47 74 IPR000433 GO:0008270
Alju08g2661 518 MobiDBLite consensus disorder prediction 213 237 - -
Alju08g2661 518 Pfam Zinc finger, ZZ type 45 85 IPR000433 GO:0008270
Alju08g2661 518 ProSiteProfiles SANT domain profile. 100 152 IPR017884 -
Alju08g2661 518 PIRSF Txn_adaptor_ADA2 33 433 IPR016827 GO:0003713|GO:0006357|GO:0035065
Alju08g2661 518 PIRSF Txn_adaptor_ADA2 424 518 IPR016827 GO:0003713|GO:0006357|GO:0035065
Alju08g2661 518 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 44 513 - -
Alju08g2661 518 Gene3D - 40 93 IPR043145 -
Alju08g2661 518 SMART zz_5 41 86 IPR000433 GO:0008270
Alju08g2661 518 Gene3D - 100 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2661 Alju-ChrAlju08 43988172 44024737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2661 1 518 EF-hand Containing Proteins AT3G07740 52.632 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju08g2661 Myb_DNA-binding 3.2e-09 CL0123