Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2658 ATGGAGGAAAACCCTAGCGCCTTCTCCTACTTCCTCTCATATAAGTACTTCTGTTGGTTGCATTCTTCTTCCTCTACCTCTGCTGCTGTAAATCTTCGCTCCGTTTCCATTCTAATGGCTTCAGAGAAGAAGCTGGCGAACCCTATGAGGGAAATCAAAGTCCAGAAGCTCGTTCTCAATATCTCAGTGGGCGAGAGTGGAGATCGTCTAACCAGAGCTGCTAAGGTGTTGGAGCAGCTTAGTGGCCAGACCCCAGTTTTCTCTAAAGCAAGATATACTGTTCGTTCCTTTGGTATCAGAAGGAATGAAAAGATTGCATGCTATGTCACAGTTAGAGGTGACAAGGCAATGCAGCTGTTGGAGAGTGGTCTGAAGGTGAAGGAATATGAACTGCTGAGAAGAAACTTCAGTGATACTGGATGCTTTGGCTTTGGCATTCAGGAGCATATTGATTTAGGAATTAAGTATGATCCTTCTACTGGCATTTATGGAATGGACTTCTATGTTGTTTTGGAGCGCCCTGGTTACCGTGTGGGACGTCGCCGTAGATGCAAGTCACGTGTTGGGATCCAGCACCGCGTCACCAAGGAGGATGCCATGAAGTGGTTTCAAGTGAAATACGAAGGAGTGATCCTGAACAAGGCCCAGACAATCGTTGGTTAG 663 0.4646 MEENPSAFSYFLSYKYFCWLHSSSSTSAAVNLRSVSILMASEKKLANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQTIVG 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2658 220 Pfam Ribosomal protein L5 47 100 IPR031310 -
Alju08g2658 220 SUPERFAMILY RL5-like 47 211 IPR022803 -
Alju08g2658 220 Pfam ribosomal L5P family C-terminus 104 202 IPR031309 -
Alju08g2658 220 Gene3D - 39 215 IPR022803 -
Alju08g2658 220 FunFam 60S ribosomal protein L11 39 212 - -
Alju08g2658 220 ProSitePatterns Ribosomal protein L5 signature. 77 93 IPR020929 GO:0003735|GO:0005840|GO:0006412
Alju08g2658 220 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 35 214 IPR002132 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2658 Alju-ChrAlju08 42812371 42814893 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2658 39 220 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 94.505 7.40e-130 362