Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2626 ATGGCGAAAAGTCCTGATTATTCAGATCCACTCAGATGGGGGGAGGCAGCAGACTCACTCAAGGGAAGCCACTTGGACGAAGTGAGAGCCATGGCGGCCGACTACCGGAGGGCCGTCGTCCATCTGGGCAGCACGTGGCTGTCGATTTCGCAGGTGGCGGCGGCGGCTAACCGGAGCTCCAACGTGAAGGTGGTGCTATCGGAGTCAGCGAGGGCCGGCGTGAAGGTGAGCAGTGATTGGATAATGGAAAGCGTTAAGAATGGGACTCCCATATACGGAGTCACCACTGGCTTTGGTGCTGCTTCTCACAAGCGAACCGACCAAGTCGCTGCTCTTCAAAAGGAGCTTGTGAGATTCTTAAACTGTGCAATATTTGACAAGGGAAAAGACATAAGGCACACTCTTCCTCAGGCAGCAACCAGAGCAGCGATGCTAGTGAGGGTGAACACTCTGCTTCAAGGCTACTCAGGCATTCGGTTTGAGATGTTAGAAGCAATCACCAAACTGCTCAACCACAACGTCACTCCTTGCTTGCCCCTCCGTGGCACCATCACCGCTTCCGGCGACCTCATCCCTCTTTCCTACATTCTCGCTTTGCTTGTTGGTCGCCCTAACTCGCAGGCCATTGGACCTTCTGGGGACTTCCTTACTCCTAAGCAGGCTTTCCTCCTAGCCGGCATCAATACCCACCATACCACTCCAGATGATGAGAGAGACACAGACATCAGTGGGTCCCACGAGGACAGGGTCAAGTTCTTTGAATTGCAGCCAAAGGAAGGCCTTGCTCTTGTAAACGGCACAGCCGTTGGATCTGGATTAGCTTCCGTGGTGCTTTTTGAAGCAAACATCTTAGCTTTATTGTCACAAGTCACATCTGCCATTTTTGCTGAAGTAATGCATGCCAAACCAGAATTCACCCACCACATGATTCACAACCTTAAGCACCATCCTGGTCAGATAGAAGCAGCTGCAATTATGGAACACATTCTAGAAGGTAGCTCTTATGTGAAGCAATCTCCTCAGACATCACAAAAACCCAAGAAAGAACGATATGCTCTTATAACTTCCCCTCAATGGCTTGGACCACAGATTGAAGTCATCAGATATTCCACAAAGTCCATTGAGAGGGAGATTAACTCTGTGAACGACAATCCTTTAATTAATGTTTCAAGTAACAAGGCTTTCCATGGTGGTAACTTCCAAGGCACACCCATTGGAGTTTCAATGGACAACACGCGATTAGCTGTGGCTTCCATAGGAAAACTTGTGTTTGCCCAGTTCACTGAGCTAGTAAACGACATGTACAACAATGGGTTGCCTTCTAATCTCTCTGCTTCTAGAAACCCAAGCTTGGATTATGGCTTTAAGGCTTGTGAAGTTGCTATGGCCTCTTACTGTTCTGAGCTTCAGTTTTTGGCAAATCCTGTGACCAGTCACGTGCAAAGTGCAGAACATCACAACCAAGATGTGAACTCTTTGGGTCTAATTTCTGCCAGAAAAACCAGTGAGGCTATTGAGATCTTGAAGCTAATGTGCTCAACTTATTTGGCTGCACTATGCCAAGCCATTGACCTTAGGCACCTGGAAGAAATCTTCATTATCACTGTGAAAAACACTATAAGCCAAGTTGCAAAAAAGATATTCCCAGCCACAGATCAAAACCCATTTCCACTCTGTGAAGAGGATTTACTCAAAGTGGTCAATAACGAGTATGTGTTTTCCTACATTGATGATCCCTTCAATGTTTCATACCCATTTATGCCAAAACTGAAACAAGTTCTTTATGAGAAGGCACACAAGAATGCTGTGAAAGAGAGGAATAATAATAATAAAGTGAACCATAGTGGTGCTTTAGTTTTTGAGAAGATTGAGGATTTTGAGGAAGAACTTAAGATTGTTTTGCCAAAGGAAGTTGAAAGAGCAAGGGTGGGTTATGAGAATGGCGAACCAGCAATTCCAAATAGGATTAAGGAGTGTAGATCATACCCATTATACAAGTTTGTGAGGGAAGAGTTGAAGACTGGGTTGCTTAGTGGAGAGAAGATCAAGTCACCTGATGAGGACTTTGATAAAGTGTTTAGAGCAATTTGTGAAGCAAGGGTTGTTGATCCACTTTTGGAGTGCCTTGCAGATTGGAAAGGAGTTCCAATTTCAATGTAA 2160 0.4574 MAKSPDYSDPLRWGEAADSLKGSHLDEVRAMAADYRRAVVHLGSTWLSISQVAAAANRSSNVKVVLSESARAGVKVSSDWIMESVKNGTPIYGVTTGFGAASHKRTDQVAALQKELVRFLNCAIFDKGKDIRHTLPQAATRAAMLVRVNTLLQGYSGIRFEMLEAITKLLNHNVTPCLPLRGTITASGDLIPLSYILALLVGRPNSQAIGPSGDFLTPKQAFLLAGINTHHTTPDDERDTDISGSHEDRVKFFELQPKEGLALVNGTAVGSGLASVVLFEANILALLSQVTSAIFAEVMHAKPEFTHHMIHNLKHHPGQIEAAAIMEHILEGSSYVKQSPQTSQKPKKERYALITSPQWLGPQIEVIRYSTKSIEREINSVNDNPLINVSSNKAFHGGNFQGTPIGVSMDNTRLAVASIGKLVFAQFTELVNDMYNNGLPSNLSASRNPSLDYGFKACEVAMASYCSELQFLANPVTSHVQSAEHHNQDVNSLGLISARKTSEAIEILKLMCSTYLAALCQAIDLRHLEEIFIITVKNTISQVAKKIFPATDQNPFPLCEEDLLKVVNNEYVFSYIDDPFNVSYPFMPKLKQVLYEKAHKNAVKERNNNNKVNHSGALVFEKIEDFEEELKIVLPKEVERARVGYENGEPAIPNRIKECRSYPLYKFVREELKTGLLSGEKIKSPDEDFDKVFRAICEARVVDPLLECLADWKGVPISM 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2626 719 Gene3D Fumarase/aspartase (Central domain) 268 714 - -
Alju08g2626 719 FunFam Phenylalanine ammonia-lyase 1 267 - -
Alju08g2626 719 CDD PAL-HAL 45 526 IPR001106 -
Alju08g2626 719 Gene3D - 2 267 IPR024083 -
Alju08g2626 719 Gene3D - 529 654 IPR023144 -
Alju08g2626 719 SUPERFAMILY L-aspartase-like 9 717 IPR008948 GO:0003824
Alju08g2626 719 PANTHER HISTIDINE AMMONIA-LYASE 251 718 IPR001106 -
Alju08g2626 719 Pfam Aromatic amino acid lyase 47 527 IPR001106 -
Alju08g2626 719 NCBIfam phenylalanine ammonia-lyase 9 709 IPR005922 GO:0005737|GO:0006559|GO:0016841
Alju08g2626 719 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 182 198 IPR022313 GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2626 Alju-ChrAlju08 41364676 41369675 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2626 8 717 Monolignol Biosynthesis Gene Families AT3G53260 66.992 0.0 990