Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g2615 ATGTCATCAACAGCGAACCCACCATGCGCGGCTTGCAAGATGCAGAGGAGGAAATGCACGCCGGAATGCGTGTTTGCGCCATATTTTCCGGCAGAGAATCCTCGGAAGTTTGCTTGTGTGCGCAAGGTTTTTGGAGCGAGCAATGTGGCCAAGATTCTGAATGACGTTAGCGTCGTGCAGCGTGCGGATGCCGTCAGATCGTTGGCTTTTGAAGCGGAGGCTCGCCTTCGGGACCCTGTATACGGCTGCGTCGGCATCATCTCCGGCCTCCAGCGCGGGCTAAATCAGCTGCAGAGTGAACTCATCGACGCCAGAAAAGAACTTGCTGCCTATATGTGTCAACAGGCCTTACTTCCCAACCACGTAATGGGATTCAGTCGGCAGGAGCTTTTGACTATCAATGTCAGTGGCGGCGGTGGCCGAGGCGGCAATGGTGGATACCCGCTGGCTGGAACACTTGTCTCTCATCAGGTTGAAACACATCATCAGGTTGATGTGCATTCTCAGCAATGGATGTTGTCACAGAAAAGCGAGGCAAGTAGAACTATGGGTCCATATACCCGTGCTTTATATGGAATCTGA 582 0.5292 MSSTANPPCAACKMQRRKCTPECVFAPYFPAENPRKFACVRKVFGASNVAKILNDVSVVQRADAVRSLAFEAEARLRDPVYGCVGIISGLQRGLNQLQSELIDARKELAAYMCQQALLPNHVMGFSRQELLTINVSGGGGRGGNGGYPLAGTLVSHQVETHHQVDVHSQQWMLSQKSEASRTMGPYTRALYGI 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g2615 193 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Alju08g2615 193 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 161 - -
Alju08g2615 193 Pfam Lateral organ boundaries (LOB) domain 8 103 IPR004883 -
Alju08g2615 193 Coils Coil 87 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g2615 Alju-ChrAlju08 40736787 40737368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g2615 3 119 AS2 family AT5G66870 64.957 8.57e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju08g2615 LOB 2.2e-39 No_clan